Protein

Protein accession
1gyND [EnVhog]
Representative
1gyND (this protein)
Source
EnVhog (cluster: phalp2_30977)
Protein name
1gyND
Lysin probability
94%
PhaLP type
endolysin
Probability: 98% (predicted by ML model)
Protein sequence
LKIRKEVNNMEYAIYPFEYMRITQRHDEGNHLAHWSPFKDYSDKPFDEATQDGGRGYFVPKNKYKVVEKTGSQNNGYNVRLETVNKVKIPYQDDPVILEVTLTHINYDDWSKLYNGQIINVGEKIIREGTSGQASGNHLHCTANFGKYYGFKKNSNGKWVFAYDKALTPEEAFYVDSTVQILNNKGYNFKEVPKRYYTKGDSGKDIENVNNYLSNKVKGDYFGDYTEATLNVFKRKNNLPEDGIIDETVLKLMGL
Physico‐chemical
properties
protein length:255 AA
molecular weight:29453,6 Da
isoelectric point:7,85
hydropathy:-0,82
Other Proteins in cluster: phalp2_30977
Total (incl. this protein): 11 Avg length: 279,8 Avg pI: 7,02
Protein ID Length (AA) pI
1FPTV 251 7,73831
2qXM8 324 6,08168
3dRYi 256 5,77094
3fPWN 293 5,88985
3ilC6 297 6,11135
3kuLA 330 8,91251
4kdjd 306 4,58511
5EJI 249 8,57753
67Ur5 249 6,31034
6u87U 268 9,35644
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_36734
6wFxi
 48 38,7% 186 1.723E-59
2 phalp2_35713
3TDiN
 29 40,1% 187 5.986E-56
3 phalp2_10424
21qZ3
 9 30,8% 172 2.126E-29
4 phalp2_25173
1Q6iX
 8 29,2% 205 1.412E-24
5 phalp2_39979
1KNyb
 59 30,6% 183 3.046E-23
6 phalp2_11194
66qoq
 192 28,1% 185 1.412E-15
7 phalp2_2324
4L5iV
 1 27,0% 185 3.900E-10
8 phalp2_10426
21zbN
 33 23,2% 215 1.700E-09
9 phalp2_21449
81MyM
 1 23,0% 182 7.652E-08

Domains

Domains
Unannotated
Unannotated
Protein sequence: 1gyND
1 255
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1gyND
Method AlphaFoldv2
Resolution 90.62
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50