Protein

Protein accession
nD2 [EnVhog]
Representative
nD2 (this protein)
Source
EnVhog (cluster: phalp2_29184)
Protein name
nD2
Lysin probability
95%
PhaLP type
VAL
Probability: 98% (predicted by ML model)
Protein sequence
MALGFFEGDNAPDTYESRERRRRLAEAMMAQGMETTPIQSWTQGAARLAQALSGNIQQRRIDSAQREADRPLQEAIAAHLRSQGMPPSASPYTAGPQADAGGAPKPNLPTMASGGNIPRMVMPDPVSADLTPQQRGLLNAIAAPESAGAYNIRYTPRGGATFAGFDAHPGVYEPGPAGPSSAAGRYQFTKTTWDRMGGGAFTPENQDRRALALASEDYKARTGRDLMGDLSANGFTPEIAQALGPTWRGLIDNPQKAIAAYRAAVGQGQPAQVAQAGGGAPAPLAGGSDFTGATPQRVASLDGLPPGPVPSNAPPMAYAASPAGAALTGALQRPTSPPIPSPQPTGNPGAALLAAAMSPGVSPQLQRQAMALYEMGQRDEGVTYVDAGDKLVPVNKRGQVVGQPIAKSRDSADWEPIKDSDGNVIGSFNKRTSETKPLSGQGGLPQPSNEVELADGTKIPIPQGDKGVFRKKIQEENANVIASAPKSFSNLERAYKNASELENHPGLKSGPFNLLGATGPLGGITTQVRGTDAYKVQARIDELLGGTFLQAYDALRGGGQITQIEGDKAQAAMSRLGKPGVGPEEYAAAIKEFKDAVRSGMEKLKRVKGMDDPRYKLPEDKPATPAKPSAPAAPMQGWSVEVIP
Physico‐chemical
properties
protein length:644 AA
molecular weight:67255,7 Da
isoelectric point:8,68
hydropathy:-0,51
Other Proteins in cluster: phalp2_29184
Total (incl. this protein): 6 Avg length: 642,8 Avg pI: 9,03
Protein ID Length (AA) pI
4qLuW 626 8,84276
50WQM 670 9,10373
5eBoB 639 9,37862
5ihFc 627 9,09251
LPxe 651 9,07181
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_26958
4EVsY
 1 25,6% 617 3.416E-21
2 phalp2_1081
7kxjO
 14 23,2% 822 5.911E-17
3 phalp2_39735
8E5n3
 2 20,8% 474 7.233E-16
4 phalp2_26963
4F9wt
 15 24,2% 531 1.078E-13
5 phalp2_681
1rTo1
 8 24,5% 521 1.878E-13
6 phalp2_26733
35hac
 2 19,1% 444 1.312E-12
7 phalp2_22642
1XL2x
 5 22,9% 619 6.393E-11
8 phalp2_11945
2OmWM
 2 23,9% 422 1.469E-10
9 phalp2_20963
7svhV
 21 22,3% 586 2.353E-09
10 phalp2_3307
2VydY
 7 22,7% 479 5.047E-05

Domains

Domains

No domain annotations available.

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
nD2
Method AlphaFoldv2
Resolution 58.25
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50