Protein

Protein accession
1gRim [EnVhog]
Representative
1gRim (this protein)
Source
EnVhog (cluster: phalp2_4063)
Protein name
1gRim
Lysin probability
89%
PhaLP type
VAL
Probability: 98% (predicted by ML model)
Protein sequence
MANVIDSLVIQLGLDGRGVAKGAQQASKSLDQVERSATKTQSALTESGKAAADGFSRARTEALALLAVFTGGRTLKAFTSEITRSNAELGYMAQRLNLDPRRLYQMQRAVMAVGGSAQEVGASFQAMQGMLVDPAQAGNLQRVMAQLGVTNYTDQRGHIRQDILRQLNRSTQGMDQGVKNTLLSQLGIGPGEINLIDQTTAAFDKLQDQFRNTGPTSDQVRDSQQLLKDWVDLTTTTEGLGRAILGDLSPAIDGVVTKITAWEKENPDLAKHIGEITLGVVALGTALGAVGTAVTGIMAIRGIKALLMGGANIEALRSAACGCECEGGPAGAAKRAGQATEAERMGGGKLSPYLAEGTDAAGGHLTLGRAALLATRLTGWGAVAYSALHADSLNKGESAAVDRLRARGAFGSDPFGAYARSVAGIEGARYDQMGGAGGKYAGKYQMGAGAIQDAARRLHEAVPTQDQFLHDPAMQERFFKAYTEQNAAVLNSKSADFRNASQTRQYAILAYAHNQGAGGALNWMRTGQVGHDAFGTAGTRYSDAATAAIRAQGAAGNITHTTEVHVGDVHIHANTDNPQQLARDFHQELRRTLPLINAQGQT
Physico‐chemical
properties
protein length:602 AA
molecular weight:63340,4 Da
isoelectric point:8,29
hydropathy:-0,27
Other Proteins in cluster: phalp2_4063
Total (incl. this protein): 10 Avg length: 626,5 Avg pI: 8,52
Protein ID Length (AA) pI
1gRab 662 8,53976
4EN3F 619 9,70792
7d7IM 614 8,89272
7lnTp 618 8,73909
7shoE 618 8,88434
7swZp 585 6,26760
7w9k0 701 8,66341
7wjur 548 7,92898
7xHc8 698 9,30603
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_1039
6XvVK
 28 30,6% 613 5.049E-90
2 phalp2_6366
7wQaE
 58 29,8% 536 2.714E-59
3 phalp2_27911
m9mT
 2 25,0% 636 1.001E-57
4 phalp2_36236
7xAo1
 1 27,0% 421 4.225E-40
5 phalp2_9424
jEqz
 2 25,1% 429 4.305E-30
6 phalp2_14762
6Sfv0
 84 22,4% 463 2.951E-27
7 phalp2_6412
eA5x
 1 20,2% 637 9.029E-17
8 phalp2_32035
5Bcj7
 44 20,7% 404 1.366E-07

Domains

Domains

No domain annotations available.

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1gRim
Method AlphaFoldv2
Resolution 62.94
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50