Protein

Protein accession
5NyBb [EnVhog]
Representative
5Q9kE
Source
EnVhog (cluster: phalp2_214)
Protein name
5NyBb
Lysin probability
98%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MANRNYFNSTDRSVSSNYIIGLTGEIVRCIPPDEESWCTNQANPYTVSIECCHPDWTGKFNDSTYNAAVELCAELCKKYGLNPTNGGIIRHYDVTKKVCPKWFVPASAGGTDTNDEQHWKKFKNDVAAKMGKKTTTSSSSTVKLSITVEQAAKDVIAGKYGNGEDRKKRIAALGLDYNTVQARVNQMLGIKTTTAVHKPAAPASNSKVAPAKSKSDSIRGTYSVTATSLYCRYIPGKLTNDNVVTAFKNGTKVQCYGYYTTVGNSKWYLVQSGKYTGYCNSKYLKKV
Physico‐chemical
properties
protein length:287 AA
molecular weight:31542,3 Da
isoelectric point:9,36
hydropathy:-0,54
Representative Protein Details
Accession
5Q9kE
Protein name
5Q9kE
Sequence length
338 AA
Molecular weight
37217,72790 Da
Isoelectric point
9,56222
Sequence
MPLEEELAAVKDRSISMNFVNAYLTHNRPGNKRRRTTAIALHWVANPGSSAMANRNYFNNTDRSVSSNYIIGLTGEIVRCIPHGEESWCTNQANPYTVSIECCHPDWTGKFNTATYNAAVELCAELCKIYGLNPTNGGLIRHYDVTKKVCPKWFVPASAGGTDTNDEQHWKKFKNDVAAKMGKKTTASNSSTVKPSITVEQAAKNVIAGKYGNGEDRKKRIAALGLDYNTVQARINQMLGIKTTTAAHKPSAPASNSRVAAAKSKSDSIRGTYSVTATSLYCRYIPGKLTSDNVVTAFKNGTKVHCYGYYTTVNNSKWYLVQTGKYTGYCNSKYLKKV
Other Proteins in cluster: phalp2_214
Total (incl. this protein): 12 Avg length: 322,7 Avg pI: 9,58
Protein ID Length (AA) pI
5Q9kE 338 9,56222
3B611 322 9,63714
5AvB 322 9,51400
5MLnq 322 9,63714
5QLi3 338 9,51381
641ne 322 9,64835
65wJ7 322 9,64816
68ZX2 338 9,56222
6sQHD 319 9,61090
80pva 322 9,63714
84MP2 320 9,57273
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_26828
3TOBT
 44 28,6% 297 2.764E-21
2 phalp2_19907
6axIZ
 11 30,7% 309 2.213E-20
3 phalp2_14834
7s5S0
 47 33,1% 244 5.748E-19
4 phalp2_11417
eYHn
 21 32,0% 237 4.760E-17
5 phalp2_1607
7ZyR0
 345 27,1% 247 3.701E-16
6 phalp2_5937
6aZNZ
 614 27,2% 279 2.857E-15
7 phalp2_12878
2omQf
 1 25,8% 341 2.857E-15
8 phalp2_27725
6UNCq
 90 28,2% 248 5.234E-14
9 phalp2_32070
5P7Lm
 156 26,2% 328 1.668E-13
10 phalp2_7920
nWil
 3 27,4% 350 5.306E-13

Domains

Domains
Ami2
CW_7
Unannotated
Representative sequence (used for alignment): 5Q9kE (338 AA)
Member sequence: 5NyBb (287 AA)
1 338 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01510, PF08230

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (5Q9kE) rather than this protein.
PDB ID
5Q9kE
Method AlphaFoldv2
Resolution 83.25
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50