Protein

Protein accession
5Ntdu [EnVhog]
Representative
5VoQx
Source
EnVhog (cluster: phalp2_224)
Protein name
5Ntdu
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MLNDVQNIGDRGLWVAQYANMDATGYQDTPWNEGAYACAIRQYSGNGRLSGYSGSLDLDKFYGDVDAWNAYKAGHSSVTNVPTPSAPAPSAPASGTYTVRSGDTLSGIASLYGTSWQVLAQINNLSDPNLIYPGQVLNINGTANTVQPGNGTYTVRSGDTLSGIAAKYGTSWQTIQRINGIADPNLIYPGQVLKLPGGAPSPSVTTYSIQPGDTLSGIAAQYGTSVSNLVALNGIANPDVIYAGQTIRVK
Physico‐chemical
properties
protein length:250 AA
molecular weight:26146,6 Da
isoelectric point:4,89
hydropathy:-0,22
Representative Protein Details
Accession
5VoQx
Protein name
5VoQx
Sequence length
177 AA
Molecular weight
19605,54850 Da
Isoelectric point
4,97525
Sequence
LLTRQSAEELWTRIFRYRDFETEIKKAGLNGFSASAGDETKEPEVSEPEGSTLDLLYRTMKDEFGGGDARKAALGSRYNEVQDVINHIDKASVQELVDEVWAGKYGDDEVRRTILGSRWQEVQDAINAGNKKYYTIKSGDTLSGIAAKYGTTVNAIAQLNGIENPNLIIAGDTIRVK
Other Proteins in cluster: phalp2_224
Total (incl. this protein): 6 Avg length: 248,0 Avg pI: 6,31
Protein ID Length (AA) pI
5VoQx 177 4,97525
1nG9q 250 4,52907
3sPq9 208 9,25291
6iuDc 249 9,42181
A0A8S5QXY8 354 4,76933
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_40352
3s9tm
 12 75,7% 107 6.017E-47
2 phalp2_38035
63Vjb
 2 39,6% 154 7.881E-28
3 phalp2_17221
3xRQT
 3 35,0% 174 5.985E-20

Domains

Domains
Unannotated
LysM
Representative sequence (used for alignment): 5VoQx (177 AA)
Member sequence: 5Ntdu (250 AA)
1 177 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01476

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (5VoQx) rather than this protein.
PDB ID
5VoQx
Method AlphaFoldv2
Resolution 83.54
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50