Protein

Protein accession
gydT [EnVhog]
Representative
gydT (this protein)
Source
EnVhog (cluster: phalp2_16650)
Protein name
gydT
Lysin probability
98%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MAKLAAPLRRLRDDNLNVKWPERPRALDGWIGDAAHQQRLSDHNPNQRGTVDALDVDSGQTGDTPIHVPTVIASMICHPSTHYVIHRRRIMSSSTKFMPHVYTGDNPHDKHIHNSIFQTTRAESSTTAYKFILKPMDWPLLTAGMNSVKVGELQAYLIGWGYAVAKDNDFGPKTVAAVKAFQNAHGLNADGKVGAKTKAKLRPFH
Physico‐chemical
properties
protein length:205 AA
molecular weight:22749,6 Da
isoelectric point:9,68
hydropathy:-0,50
Other Proteins in cluster: phalp2_16650
Total (incl. this protein): 31 Avg length: 214,9 Avg pI: 9,85
Protein ID Length (AA) pI
1IQdQ 218 11,09245
1gOl0 227 9,94987
1jqt1 257 9,58511
2Pbbc 218 11,20623
3V4I4 242 5,93862
3nfV 218 11,36856
401QP 201 9,69342
44RxU 205 9,93337
4Ff6y 212 10,90955
4FwtQ 215 9,53521
4HRyg 201 9,93595
4Ihrn 167 10,54343
4Jmyy 229 10,39870
4Qseb 155 9,51793
4Qygp 236 9,31802
4Tn1v 201 9,73358
6GBVQ 204 11,00000
6KOCA 211 9,29881
6T9uO 252 5,49891
6THIr 201 10,30303
6TIYf 203 10,52319
6ThD5 244 7,14343
6W70F 201 6,19974
7YlFW 218 11,36856
7lGPd 185 10,56503
82o3l 264 9,74190
8d7wU 218 11,29165
8q5ue 218 11,36856
8qGwZ 218 11,29642
8uAiy 218 11,43258
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_30242
4eMiX
 353 38,5% 218 9.172E-68
2 phalp2_398
7qxjv
 88 34,3% 259 9.716E-59
3 phalp2_30097
36Djl
 42 33,6% 202 7.204E-56
4 phalp2_32428
UbvX
 6 43,5% 131 7.376E-50
5 phalp2_5653
4qGYj
 5 35,0% 214 9.121E-49
6 phalp2_17378
4HT0A
 1 48,8% 125 7.430E-47
7 phalp2_17708
72vnW
 1 32,5% 221 3.574E-40
8 phalp2_14712
6AkSv
 56 40,2% 134 6.634E-37
9 phalp2_36813
6TSIv
 5 28,1% 188 5.949E-36
10 phalp2_37641
4fPRF
 5 36,2% 127 1.866E-34

Domains

Domains
PG_1
Protein sequence: gydT
1 205
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01471

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
gydT
Method AlphaFoldv2
Resolution 94.87
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50