Protein

Protein accession
1gD1I [EnVhog]
Representative
1gD1I (this protein)
Source
EnVhog (cluster: phalp2_26342)
Protein name
1gD1I
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MEKKIWDFLKQNGFNDFAIAGLMGNLFAESGLKPTNLENTYNNEFNLSDSEYTEKVDNGTYTNFIKDRAGYGLAQWTYWTRKQNLLNFAKSKNKSIGDLEMQLEFLIKELKESFGSVYNVLKNASSIQQASDAVLMDFERPYNAAAQKSKRAVMG
Physico‐chemical
properties
protein length:155 AA
molecular weight:17683,7 Da
isoelectric point:6,34
hydropathy:-0,58
Other Proteins in cluster: phalp2_26342
Total (incl. this protein): 16 Avg length: 182,6 Avg pI: 5,65
Protein ID Length (AA) pI
1GTxe 196 5,20846
1Nyx4 230 5,02141
21vl1 185 4,40203
2oamB 223 5,13258
2onzK 185 4,82622
3TCg7 210 5,46356
3iVbR 216 7,01168
3ms59 147 7,75462
3nNGC 123 4,90608
3oZFq 149 5,15464
4JYRs 214 4,66201
5KLdR 187 4,81889
6dnck 177 8,54072
8bIdk 135 5,31896
8t9mP 189 5,76100
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_1955
4xoGF
 24 61,3% 150 2.855E-66
2 phalp2_6190
5KbJP
 74 60,0% 155 4.454E-64
3 phalp2_19569
3VG9W
 31 55,4% 155 8.673E-61
4 phalp2_39699
a2Er
 1 53,4% 144 4.238E-50
5 phalp2_12138
5YzTh
 42 65,6% 102 4.377E-47
6 phalp2_38855
1JedZ
 48 47,6% 149 1.928E-45
7 phalp2_16715
N0Yx
 1 49,1% 124 2.186E-43
8 phalp2_29620
7YA16
 2 55,0% 109 2.186E-43
9 phalp2_28999
6tQbt
 1 59,0% 105 5.407E-36
10 phalp2_23409
6aAEL
 4 38,0% 147 4.454E-34

Domains

Domains
Phage_lys2
Protein sequence: 1gD1I
1 155
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF18013

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1gD1I
Method AlphaFoldv2
Resolution 96.07
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50