Protein

Protein accession
1gD0p [EnVhog]
Representative
1gD0p (this protein)
Source
EnVhog (cluster: phalp2_25083)
Protein name
1gD0p
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MSGYRDASDEIVTKLLRCRIDLFKEILEGYAGGINLGETNNTVEYKNTLVNNPIEINIGGGGGEMIDPSLCVATAPGVIVFGATKYTRARKGPIKYLVIHYTAGGSSKGGAAKRTCEMWVNSSRPASADFVVDDETMYQYTPDPAKYACFAVGKPKRGVPYNMHNCVSIEVCSSFNKKIGKSVNNPNDKGWYYSNATLGNAIKLAKIIMQKYNIPINNVIRHYDVSGKLCPGIIGWNSESGSITNWNQFKSMLA
Physico‐chemical
properties
protein length:254 AA
molecular weight:27759,4 Da
isoelectric point:9,04
hydropathy:-0,27
Cluster Membership

This protein is the only member recorded for this cluster.

Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_8936
3ibqX
 105 49,5% 202 5.445E-47
2 phalp2_1605
81mMl
 270 43,8% 171 3.683E-31
3 phalp2_7116
2lzss
 1 40,8% 174 2.811E-29
4 phalp2_29669
8sfID
 1005 37,7% 167 2.163E-21
5 phalp2_24299
3nIle
 36 36,3% 168 1.553E-19
6 phalp2_7264
3WBGP
 11 34,6% 182 2.107E-19
7 phalp2_24292
3k9WX
 42 34,3% 166 5.595E-13
8 phalp2_14370
4kdQT
 17 26,9% 197 1.846E-12
9 phalp2_5052
1q1Q3
 64 29,4% 156 1.250E-09
10 phalp2_33479
7swgL
 97 31,0% 158 5.433E-09

Domains

Domains
Ami2
Protein sequence: 1gD0p
1 254
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01510

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1gD0p
Method AlphaFoldv2
Resolution 78.52
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50