Protein

Protein accession
5M3dP [EnVhog]
Representative
5R51w
Source
EnVhog (cluster: phalp2_2516)
Protein name
5M3dP
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MAVTGAKVIKTAEKYLGKGGTFVWNYYGLAKGTAWCAAFVSYVMSKAGAKSLFYDGKPVFYVPYAQQWLKKHCTHVKMANAKAGDIVIFTWDGNGYNSERGSRDHIGFVRKAGTSSTVYTIEGNTSGSKVAKRTRASRYIYGIYRPKYSTAKKKTTTAKKEANNVKPKVYLSPSNHGTNQNKCLKSKCYEDKHTRPIAEACAKYLRQSGIDVKIAAKKTSVLKGSRTKEADKWGADLYIPIHTNACDDKSVRYLMFMCANTTGKYEKAYEKIAPSVKAVYPGGNTKFVKRTDLYEINNPKALTFYCEMGFHTNKKDCEEFIHKSDMVGKALAKGICKYFGKTFTDSTSTYKVKITADTLNVREGAGVNTKVVGKVKKDGVYTIVKTSGNWGKLKSGAGWISLKYVKKCR
Physico‐chemical
properties
protein length:409 AA
molecular weight:45429,9 Da
isoelectric point:9,81
hydropathy:-0,52
Representative Protein Details
Accession
5R51w
Protein name
5R51w
Sequence length
409 AA
Molecular weight
45682,17540 Da
Isoelectric point
9,78277
Sequence
MAVTGSKVIKTAEKYLGKGGTFVWNYYGLAKGTAWCAAFVSYVMNKAGAKSLFYDGKPVFYVPYAQQWLKKHCTHVKMANAKAGDIVIFTWDGNGYNSERGSRDHIGFIRRKGTSNTVYTIEGNTSGSRVANRTRAARYIYGIYRPKYSTSKKKTTTAKKEANNVKPKVYLSPSNHGTNQNKCLKSKCYEDKHTRPIAEACAKYLRQSGIDVKIAAKKTSVLKGSRTKEADKWGADLYIPIHTNACDDKSVRYLMFMCANTTGKYEKAYEKIAPSVKAVYPGGNTKFVKRTDLYEINKPKALTFYCEMGFHTNKKDCEEFIHKSDMVGKALAKGICKYFGKTFTDSTSSYKVKIIADELNIREGAGVNTKVVGKVKKDGIYTIVKTSGNWGKLKSGAGWISLKYVEKCR
Other Proteins in cluster: phalp2_2516
Total (incl. this protein): 7 Avg length: 408,9 Avg pI: 9,78
Protein ID Length (AA) pI
5R51w 409 9,78277
5Kmsz 409 9,75544
5TNxR 409 9,77549
63Gwo 408 9,81223
6mTKf 409 9,79051
6vV4n 409 9,73526
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_23413
6e4A5
 8 26,8% 409 2.167E-23
2 phalp2_31681
3e21Z
 1 29,4% 333 1.305E-14
3 phalp2_5910
5Ryc5
 40 27,6% 372 1.688E-13

Domains

Domains
CHAP
Ami3
SH3_3
Representative sequence (used for alignment): 5R51w (409 AA)
Member sequence: 5M3dP (409 AA)
1 409 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01520, PF05257, PF08239

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (5R51w) rather than this protein.
PDB ID
5R51w
Method AlphaFoldv2
Resolution 92.20
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50