Protein

Protein accession
5M2yd [EnVhog]
Representative
88amH
Source
EnVhog (cluster: phalp2_28577)
Protein name
5M2yd
Lysin probability
94%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MKDNKKLFIILLALATISILVGFLVSLNAQTSVDDATITFPNLEVSRLETSYPSISLVPIESTNIESDHVEPEDTESTTVLEDTESETHIDVGSEPEVKFDPYIQLTDDEIYELATLVWLEGYAESPDCQRAIVSVVINRMRLWNMSLKDVIYASGQFTPAWMIEFTKPDLAQIGYVMDVIEYGPNIPEYVCYFRSKHFHNWDGMYDFEQMGKTYFSYSSQDHELYLRNSTR
Physico‐chemical
properties
protein length:232 AA
molecular weight:26644,6 Da
isoelectric point:4,32
hydropathy:-0,19
Representative Protein Details
Accession
88amH
Protein name
88amH
Sequence length
231 AA
Molecular weight
26265,27250 Da
Isoelectric point
4,29495
Sequence
MKDNKKLFVILLAIATISILIGFSVSLHAQTSVDDATITFPNLAVSRLETSYPGISLVPIESTNIESDHVEPEDTESTTVPEDTESETPIDAGSEPEVKIDPYIQLTDDEIYELATLVWLEGYAESPDCQRAIVSVVINRMRLWDMSLKDVIYASGQFTPAWMIEFTTPDLAQIGYVMDVIEYGPNIPEYICYFRSKHFHSWSGMYDFEQMGKTYFSYSSKDYELYLRNSK
Other Proteins in cluster: phalp2_28577
Total (incl. this protein): 2 Avg length: 231,5 Avg pI: 4,31
Protein ID Length (AA) pI
88amH 231 4,29495
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_10779
3PvFf
 4 31,3% 153 2.448E-07
2 phalp2_24051
84SeP
 1 30,0% 150 4.724E-05

Domains

Domains
Disordered region
Hydro_2
Representative sequence (used for alignment): 88amH (231 AA)
Member sequence: 5M2yd (232 AA)
1 231 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF07486

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
5M2yd
Method AlphaFoldv2
Resolution 76.75
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (88amH) rather than this protein.
PDB ID
88amH
Method AlphaFoldv2
Resolution 75.01
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50