Protein

Protein accession
5KvDQ [EnVhog]
Representative
6usPd
Source
EnVhog (cluster: phalp2_8093)
Protein name
5KvDQ
Lysin probability
99%
PhaLP type
endolysin
Probability: 77% (predicted by ML model)
Protein sequence
MTDIPKQIWDYLAKKKGLGSVTTAAFMGNMAIESRYDPTAENEIGAYGLCQWLDRRSNLEQFTSQKGKPISDLETQLEFILYEISGSENGAYSQMLQYTTVEEQTVACCDYYERPGKGEHKHDQRIAAALEAFQKQGEGITIDNTYDASSSFYGGSKPLSSDSGFKYIEHGKSVTIIKLPENKTFCEPIYPDLITVSDTVPQWIIDVAVQNQNAKIEEANKKTDTK
Physico‐chemical
properties
protein length:226 AA
molecular weight:25311,0 Da
isoelectric point:4,86
hydropathy:-0,59
Representative Protein Details
Accession
6usPd
Protein name
6usPd
Sequence length
234 AA
Molecular weight
25967,48750 Da
Isoelectric point
4,73818
Sequence
MADTKQNIDKVATGPDDYPGRIWDYLMGKGLSSISTAAFMGNIWQESKYNPAAVNGIGATGICQWLSDRKDALQNLASQQGKAITDLDVQLDYLWSEIDGPEHSAYAEMIQYPDDLSQQTIICCDKFERPGENEHVHEQRIAAAQEAYQKQGKGIKVENTYSGSSGYSSGSAKASDGGFRYIEHGKTVTIIKLPDNKTFCEPIYPDFVTVSDTVPQWVLDMSYQKQAENDSKEK
Other Proteins in cluster: phalp2_8093
Total (incl. this protein): 2 Avg length: 230,0 Avg pI: 4,80
Protein ID Length (AA) pI
6usPd 234 4,73818
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_27182
3eXNP
 10 31,8% 198 1.021E-14
2 phalp2_9812
8fCdT
 4 27,9% 197 6.281E-14
3 phalp2_38048
6eiJ9
 6 19,0% 215 2.548E-07

Domains

Domains
Phage_lys2
Representative sequence (used for alignment): 6usPd (234 AA)
Member sequence: 5KvDQ (226 AA)
1 234 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF18013

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
5KvDQ
Method AlphaFoldv2
Resolution 76.81
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (6usPd) rather than this protein.
PDB ID
6usPd
Method AlphaFoldv2
Resolution 71.76
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50