Protein

Protein accession
d4bm [EnVhog]
Representative
d4bm (this protein)
Source
EnVhog (cluster: phalp2_10112)
Protein name
d4bm
Lysin probability
97%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MAHIDAARQIFLDSIERYALEAARAQGVPVVPKAVAAQAALESDWGRSRLALEGNNLFGVKAGSSWRGPVIELPTWEVVDGHRIETVARFRRYEDFEAAVQDYVAIIGRLDWYRDAREAARYGDPYGFLYGLEGRGGEPGWATDPDYARKVLALMRTYNLLDGPHPVWADRVYLNGFNVGAERVSIAHTETAGVKVYVLARPKRMGLWTRLSGAWALVTGRWG
Physico‐chemical
properties
protein length:223 AA
molecular weight:24876,9 Da
isoelectric point:7,96
hydropathy:-0,22
Other Proteins in cluster: phalp2_10112
Total (incl. this protein): 3 Avg length: 223,0 Avg pI: 8,98
Protein ID Length (AA) pI
38x3V 223 9,50581
3buf0 223 9,46894
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_24548
7J4ML
 47 48,2% 141 4.619E-39
2 phalp2_30438
7FbFs
 6 38,5% 205 1.526E-27
3 phalp2_5346
2cQBB
 648 40,5% 153 2.500E-26
4 phalp2_23271
4Y2T6
 95 35,6% 157 2.066E-18
5 phalp2_14516
4U1py
 1 39,7% 146 2.809E-18
6 phalp2_28108
7xE0g
 17 33,1% 154 8.183E-17
7 phalp2_19667
4yvE1
 134 32,4% 151 1.509E-16
8 phalp2_8561
1Ibzf
 44 36,3% 154 3.776E-16
9 phalp2_374
7enmQ
 47 33,9% 156 9.439E-16
10 phalp2_30397
4MmCW
 1 34,2% 140 1.281E-15

Domains

Domains
GLUCO
Disordered region
Protein sequence: d4bm
1 223
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01832

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
d4bm
Method AlphaFoldv2
Resolution 79.57
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50