Protein

Protein accession
5Jmdq [EnVhog]
Representative
8Dene
Source
EnVhog (cluster: phalp2_16635)
Protein name
5Jmdq
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MSATRYPPATWKGDGESAGSYQSAPWRIVLHTTETEGVPGYDGGSSAPHLTYNVRDRKWWQHTDLGTAARALKNLDGGVQTNRQRALQVEIVCYSDKNVADDDPSDRYWVGNLPDTAYTDLCAFLIWAATQYGVVTKWPGKAALSYSQANASGFRMSSGEWNNYNGVCGHQHVPENDHWDPGAIDWDRLMEGMSMEGPNGEPNWDEVSDWAKNAWTQAYMANLLTDDSHPGDELTVEQSMVYLARAKVI
Physico‐chemical
properties
protein length:249 AA
molecular weight:27709,1 Da
isoelectric point:4,76
hydropathy:-0,67
Representative Protein Details
Accession
8Dene
Protein name
8Dene
Sequence length
217 AA
Molecular weight
24157,45740 Da
Isoelectric point
5,06011
Sequence
mgrtltgkaiypaadyrpvpgwettgvltdtenlklvwhktqgssdpyewykqsggvphltlqrdgtldqhyffshfsralknlaggietnreciqvevvgwvgteatdaqletivaliqwcngtlgiptvwplgrprgaadhgphrdsvfdhtagqyghsqvgeqdhadpcwtdrewsyildrtgpivddmddstldsrdvykklagletgevhpl
Other Proteins in cluster: phalp2_16635
Total (incl. this protein): 4 Avg length: 217,5 Avg pI: 4,65
Protein ID Length (AA) pI
8Dene 217 5,06011
4TIGV 181 4,34786
5Jaue 223 4,42562
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_34768
3jrRV
 4 66,8% 217 8.974E-85
2 phalp2_14944
iLvY
 3 37,0% 208 5.575E-29
3 phalp2_37893
7G9at
 52 31,0% 190 1.713E-27
4 phalp2_19394
2oOR4
 46 29,5% 203 4.614E-25
5 phalp2_18777
16UHp
 8 23,7% 181 3.254E-18
6 phalp2_21478
8vsZj
 7 26,1% 199 8.186E-18
7 phalp2_25153
1IJTT
 13 34,1% 167 5.999E-16
8 phalp2_30537
5zl7l
 3 26,9% 197 5.558E-12
9 phalp2_29636
8auGQ
 3 25,4% 177 2.519E-11
10 phalp2_19937
6D1ia
 11 30,9% 181 4.605E-11

Domains

Domains
Unannotated
Representative sequence (used for alignment): 8Dene (217 AA)
Member sequence: 5Jmdq (249 AA)
1 217 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
5Jmdq
Method AlphaFoldv2
Resolution 87.79
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (8Dene) rather than this protein.
PDB ID
8Dene
Method AlphaFoldv2
Resolution 82.32
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50