Protein

Protein accession
5GL8u [EnVhog]
Representative
8sILM
Source
EnVhog (cluster: phalp2_32729)
Protein name
5GL8u
Lysin probability
99%
PhaLP type
endolysin
Probability: 98% (predicted by ML model)
Protein sequence
MGADFAKSFAVWLVCEGSEPAGIEQTTYDEYRRRHSLPPQPVAKITDAETQGLLREFYWQPYRLGGLPQPWATFCLVEASNLPSGAGVKIAQASLAWLGVYDGQVDGDVGPLTIEAAGKAPTRQDVAITAALGHYAVSSPENIQRGLRRRLAVLRQACLEQAQ
Physico‐chemical
properties
protein length:163 AA
molecular weight:17711,8 Da
isoelectric point:5,68
hydropathy:-0,20
Representative Protein Details
Accession
8sILM
Protein name
8sILM
Sequence length
187 AA
Molecular weight
20693,36850 Da
Isoelectric point
7,78509
Sequence
MPEPVERPRGSFEVVLPRTLIHEGGWYDGSKPHDPNPTMKGVTQATYDAWRTRRGLPTQTVRKIMPQELESIYRTYWSAVQGDLYGPMTAELMFDHAVNAGPVAAIRALQRTLGLDDDGVIGPKTRAAIAWAEDEPLAAALGYERLKEYCRIARNPVKRPALLSWVTRVLGPGREAADACLGTPDRG
Other Proteins in cluster: phalp2_32729
Total (incl. this protein): 7 Avg length: 177,9 Avg pI: 7,79
Protein ID Length (AA) pI
8sILM 187 7,78509
1QnUr 190 9,77923
1vBN1 180 9,68052
3npz4 138 7,83705
6R033 174 9,09554
7h5CA 213 4,67219
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_23908
1Le4q
 257 40,8% 159 5.536E-42
2 phalp2_37851
4LyyS
 5845 41,1% 163 3.679E-38
3 phalp2_18877
1MrjM
 564 42,0% 169 9.442E-38
4 phalp2_14059
8aO3S
 400 37,5% 168 4.446E-28
5 phalp2_12946
360Ik
 1926 33,1% 160 1.555E-27
6 phalp2_25028
ZsUq
 3460 32,5% 160 1.390E-26
7 phalp2_30515
5lEwY
 188 34,7% 161 9.077E-26
8 phalp2_29938
8lh6b
 3 31,0% 158 2.066E-24
9 phalp2_38528
1E3i8
 441 30,3% 135 1.633E-22
10 phalp2_20698
4XKIk
 408 34,5% 162 2.231E-22

Domains

Domains
GH108
Representative sequence (used for alignment): 8sILM (187 AA)
Member sequence: 5GL8u (163 AA)
1 187 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF05838|PF09374

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
5GL8u
Method AlphaFoldv2
Resolution 93.54
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (8sILM) rather than this protein.
PDB ID
8sILM
Method AlphaFoldv2
Resolution 87.32
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50