Protein

Protein accession
5F1YM [EnVhog]
Representative
5sL0N
Source
EnVhog (cluster: phalp2_30526)
Protein name
5F1YM
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MPKPQITWLISPHHNLRPGGEADVDTIVLHHTAGTGSARSTALYFADPKSKVSSHYVIGKDGAIVQCVQDAKRAWHAGQSAFRGRGDVNDFSIGIELVNRGDGKDPFPDPQYWALADLVAYLMQAYRIPAERVVGHRDVALPPGRKTDPASNFDWARLRRLVGDRQKPAAPRPVSPAPPAAAPAPAQERTVMNLNAKAIPVALNVLAGVAVAAEASTGFLKTCCGEGWYYVAVGALALLNGIFILATGKSSKQLAGKEG
Physico‐chemical
properties
protein length:259 AA
molecular weight:27559,2 Da
isoelectric point:9,38
hydropathy:-0,15
Representative Protein Details
Accession
5sL0N
Protein name
5sL0N
Sequence length
230 AA
Molecular weight
25408,53660 Da
Isoelectric point
6,75477
Sequence
MALPPIIKLLPADHWIDRAGQPIVAIVAHGTGGTDSRATLQHGDGRGISIHVLIQKPGVIYRMVADERGANHAGAPTSSFMLSGHTYRGKAVNQATLGFELENLQDGRDPYTDPQLLAMGWQIATWRARYGNLPLLRHADLDPTRRRDPYQLSVETMERWSARAQAQMAPLPQPPRPYRVIGLPVYQREDRTGVVAGYVHEGTTVLIDDPTNGHLQNELGFIDMRGTEAL
Other Proteins in cluster: phalp2_30526
Total (incl. this protein): 6 Avg length: 249,0 Avg pI: 7,77
Protein ID Length (AA) pI
5sL0N 230 6,75477
4W4ge 250 6,37895
5H3CA 239 7,78670
8aJ1Y 257 9,19463
tzFq 259 7,11797
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_31626
4C5ft
 15 35,4% 206 3.753E-35
2 phalp2_38674
87xKu
 58 41,8% 148 7.534E-33
3 phalp2_11760
45aqa
 242 34,2% 149 4.242E-26
4 phalp2_11251
6GtZw
 14 30,2% 172 2.722E-25
5 phalp2_25092
1jplP
 8 29,5% 166 7.248E-21
6 phalp2_21916
4KsAl
 20 25,0% 164 2.132E-19
7 phalp2_6728
24ioh
 33 25,6% 179 2.132E-19
8 phalp2_14205
2T4FQ
 8 28,0% 228 2.897E-19
9 phalp2_2008
2dyt3
 7 26,1% 172 7.273E-19
10 phalp2_34603
5dFWp
 4 34,6% 150 5.279E-17

Domains

Domains
Ami2
Representative sequence (used for alignment): 5sL0N (230 AA)
Member sequence: 5F1YM (259 AA)
1 230 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01510

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
5F1YM
Method AlphaFoldv2
Resolution 76.37
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (5sL0N) rather than this protein.
PDB ID
5sL0N
Method AlphaFoldv2
Resolution 91.96
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50