Protein

Protein accession
RcDe [EnVhog]
Representative
RcDe (this protein)
Source
EnVhog (cluster: phalp2_36410)
Protein name
RcDe
Lysin probability
88%
PhaLP type
VAL
Probability: 99% (predicted by ML model)
Protein sequence
MAGKLGYKFVNPALTSDEKTAVKSAGIPTDNLPHKRLLLGVNRLGAATNSIYDSVKALKGLEEVRAISLRDEEVDKRRARRDKKLDKAEDRQEGKLTKKEMQGGEKEAANKIKKDKKSKGILERIFGPIFNLLAPFIKFTALLSALKWFSDPKNTEKVERFVEFLGEIFKFLYKWAEFGVKNVLNGLGDVFGGVNKFKEGNILGGAWDSVMGLGQLLMGLIALKGLALFLNPFKLMGRILDLMDVVDSQEKGGGPLDCLPDPTDAKGPKGRRPKGKFAKLLQRARIGIKRLRRFLKPILLRAIALLSGLASSLAGRIARFGASFMQRVAQPLIKQASEELVKRLPAGVVEGAGALRKTGENLVKNVTGGLAKGADDLAKGASNVAGFATQQGSRFRNWAGGLWQGAVKGKDALFKAASDRWATMKQGAIDMAQSAMKTAKGWGDNIIKGVVDLKNKAAQQVVDGILAPLKSQADNLIAKSPVLQKVLGIFGGGAGKEGLGEAAEAAFKKFLNFAKPTIEPLAKTLKGLNLPVIDTVIEGLFALYNLKQGVPPVRVAMRLGGSIAGLALGTALTGSAAFFSGGMGAFLAPVLIGVTQFGGEWLADRLADMMGIPEGPGDDPETEGSFATGGIITERSFIEVAEKEPEVVADLGFIKQLINPMTSILPGASMLVGSMASLIDTLGNVPGVSSVKGELNSIASAPVSYTHLRAHE
Physico‐chemical
properties
protein length:712 AA
molecular weight:75805,5 Da
isoelectric point:9,77
hydropathy:-0,03
Other Proteins in cluster: phalp2_36410
Total (incl. this protein): 3 Avg length: 792,7 Avg pI: 9,79
Protein ID Length (AA) pI
1zZQP 942 9,70676
vEpK 724 9,89372
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_3239
2fNDr
 4 26,6% 652 1.071E-25
2 phalp2_36585
1RsVH
 6 22,2% 617 1.057E-21
3 phalp2_21375
24eO3
 3 23,6% 631 1.775E-17

Domains

Domains

No domain annotations available.

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
RcDe
Method AlphaFoldv2
Resolution 35.55
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50