Protein

Protein accession
PdXL [EnVhog]
Representative
PdXL (this protein)
Source
EnVhog (cluster: phalp2_38378)
Protein name
PdXL
Lysin probability
98%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MQGLVQRGLPPHVAQGFVMNMRDESGLNPGINEVAPTVPGSRGGFGLYQLTGPRRRAYEAFAQERGVNVADPDAQLDFLMTELQGPESRAAQSIFATENPQ
Physico‐chemical
properties
protein length:101 AA
molecular weight:10927,1 Da
isoelectric point:4,97
hydropathy:-0,46
Other Proteins in cluster: phalp2_38378
Total (incl. this protein): 6 Avg length: 121,5 Avg pI: 6,68
Protein ID Length (AA) pI
1KiRZ 104 4,86561
1k0Vl 126 5,30907
2ckdH 142 10,00970
4f5Az 107 5,39598
4nP4v 149 9,51626
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_3686
4WrKW
 1 68,8% 90 3.256E-36
2 phalp2_4146
1KaIV
 1 44,0% 93 3.327E-18
3 phalp2_29265
hzvN
 2 39,3% 99 2.040E-16
4 phalp2_19698
4HRPh
 1 37,3% 99 6.090E-14
5 phalp2_19991
6SY5V
 1 41,7% 67 1.323E-11
6 phalp2_34537
7CGEa
 1 35,1% 94 1.270E-07
7 phalp2_37100
1arKG
 1 30,2% 86 8.445E-07
8 phalp2_3849
6EOW1
 3 32,5% 83 5.607E-06
9 phalp2_19492
3dW6Q
 1 31,2% 80 1.979E-05

Domains

Domains
Phage_lys2
Protein sequence: PdXL
1 101
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF18013

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
PdXL
Method AlphaFoldv2
Resolution 87.03
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50