Protein

Protein accession
53lqh [EnVhog]
Representative
5m183
Source
EnVhog (cluster: phalp2_24620)
Protein name
53lqh
Lysin probability
96%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MYKNYNQQVSGCVAKTIFALILVVSGGIFFIPTPSIKPLPYVQVTQEQLDYEPIPESRLVDWEHDQNLRTPVEIFKIKPPSITILTDVSPGIILHISSEKISITPQEKNCLIRNVFYESGGEPYEGKIAVAQVTWNRLRSGAWGRDFCRVIHAPNQFSWTKDPVRRNRPLTGAQVAAVQSAVDDFLAGTRVSKLITATHFHATYVRPRWATSDARLKQIGGHVFYALR
Physico‐chemical
properties
protein length:228 AA
molecular weight:25718,2 Da
isoelectric point:9,40
hydropathy:-0,16
Representative Protein Details
Accession
5m183
Protein name
5m183
Sequence length
233 AA
Molecular weight
26508,74140 Da
Isoelectric point
9,29662
Sequence
MYNQNYADRVTYYVTNSIIIATIVAWLSLSTPFDHPSNDRPFTERLYYRPAESFPVVLTTPVVRVHELPPIGIVPDVYPVKKPAVVARPLPPRVVDPILYRANETVTLSQQDKNCLIRNVFFEAGSEPYAGKIAVAHVTWNRVQSGQWGNTVCQVVHAPHQFSWTAESSARHRAPYGPHWEATRQAVYDFLDGQRVSGLHRSMNFHAVHVRPDWARPDRQVARIGGHVFYALN
Other Proteins in cluster: phalp2_24620
Total (incl. this protein): 3 Avg length: 229,7 Avg pI: 9,30
Protein ID Length (AA) pI
5m183 233 9,29662
51wIn 228 9,20062
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_8528
1rrcd
 232 30,6% 160 6.693E-18
2 phalp2_45
7E8g0
 9 32,1% 143 4.791E-16
3 phalp2_28177
8ASNz
 53 28,6% 213 5.449E-15
4 phalp2_34587
56GFX
 1 30,8% 162 8.392E-11
5 phalp2_17998
1gOqM
 126 30,2% 142 2.770E-10
6 phalp2_11730
29VNG
 9 29,3% 150 1.653E-09
7 phalp2_17418
4RIk7
 356 31,9% 147 1.318E-08
8 phalp2_10779
3PvFf
 4 29,3% 167 1.396E-07
9 phalp2_11666
1IRN9
 3 25,9% 162 3.373E-07
10 phalp2_30522
5nIjU
 6 28,2% 163 2.623E-06

Domains

Domains
Hydro_2
Representative sequence (used for alignment): 5m183 (233 AA)
Member sequence: 53lqh (228 AA)
1 233 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF07486

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
53lqh
Method AlphaFoldv2
Resolution 75.04
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (5m183) rather than this protein.
PDB ID
5m183
Method AlphaFoldv2
Resolution 74.75
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50