Protein

Protein accession
52gdh [EnVhog]
Representative
5jUKb
Source
EnVhog (cluster: phalp2_9044)
Protein name
52gdh
Lysin probability
95%
PhaLP type
endolysin
Probability: 79% (predicted by ML model)
Protein sequence
MCTATSPGQGGRKKTPSGVIYYDNTPAGHIAAAEDQKKTGGGGDNERPDPPPAPPVDLTDCTAYTDAQWDTGCSKSFRFSQMKYKPKDGEGSCPAVQIACNWQKLCQQVLDPLKAQFPAININSGYRTRAFDISLGGSGSGDHTWGRAADLSLGGAEGAKAIFKFIRSSGLPFSQLLYEGTWTHVALGGSSNAASAIGVTRNGKAPFTWHARSGGGLPSDLV
Physico‐chemical
properties
protein length:222 AA
molecular weight:23269,7 Da
isoelectric point:8,50
hydropathy:-0,46
Representative Protein Details
Accession
5jUKb
Protein name
5jUKb
Sequence length
230 AA
Molecular weight
24439,96660 Da
Isoelectric point
7,58104
Sequence
MCSVKPTKNGGRKITPSGIVYYEDNAEGHAAAAEDQRTTQGGGDVGEATQPPGEEPLPPDTTDCSTYTDAMWDTACSKYYKFAHMKYKPAPNGGQSAAQIACNWQKLCKNILDPIRDAGFPITLSSGYRSPAYNASIGGSNTSDHTFACAADIQLLNGDAVENAKNLFKWIGKSGLPFSQVIFEGRWVHISYGGKSPASVAVLVTRNGKAPYQNGGGRSGANLPADLKWA
Other Proteins in cluster: phalp2_9044
Total (incl. this protein): 53 Avg length: 237,8 Avg pI: 7,40
Protein ID Length (AA) pI
5jUKb 230 7,58104
159vG 234 6,50758
17LuV 221 6,57402
17NgD 240 8,14334
186LN 300 6,58334
1PZbp 248 8,64761
27O95 234 7,59087
283Ea 224 6,29267
283xC 242 8,13805
2869L 228 7,60406
2FmTt 224 7,58729
2FnKd 223 6,98877
2RW6r 218 7,62571
301f9 224 8,56954
33H8k 233 7,60440
372mb 230 8,18054
37CwS 226 7,61082
3b3y1 222 6,40055
47Ins 222 6,87322
49ovj 234 7,56165
4FNkq 239 7,61076
4YBj2 224 5,72166
4agul 223 6,30080
4fBlN 221 7,66692
4fFbj 231 7,59150
4ljSc 234 8,14618
4nMvB 235 8,14888
5ITCJ 300 6,20695
5cKpG 218 7,62617
5kLoH 234 7,58814
5kLuk 222 8,17177
5kWqQ 307 8,37343
5ktTt 226 6,29267
5ldNH 247 6,94239
5mxAg 234 7,57319
5zymM 247 6,94194
6AQ3R 225 8,55033
6Ce24 224 8,55033
6HKJL 234 8,14328
6K9sp 234 8,13290
6Ka0w 234 7,59104
6LvQA 240 8,15417
6M4Us 245 6,94319
6M5bk 234 8,14611
U2Lz 223 6,81837
crKi 214 7,65345
en5i 300 5,52784
mUdc 302 5,93572
mVe7 300 6,58289
x65j 210 7,61855
xgUT 240 7,59928
A0A6J5TBA9 221 6,28363
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_16917
27IpW
 2 26,7% 161 4.262E-14
2 phalp2_39673
6W8fS
 8 28,0% 207 4.262E-14
3 phalp2_6269
6JaGY
 13 29,0% 162 1.185E-12
4 phalp2_9343
62cG
 14 29,0% 162 9.747E-12
5 phalp2_22175
6LWMg
 5 24,5% 151 3.061E-08

Domains

Domains
PET_M15
Representative sequence (used for alignment): 5jUKb (230 AA)
Member sequence: 52gdh (222 AA)
1 230 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF08291

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (5jUKb) rather than this protein.
PDB ID
5jUKb
Method AlphaFoldv2
Resolution 86.34
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50