Protein

Protein accession
8yRd [EnVhog]
Representative
8yRd (this protein)
Source
EnVhog (cluster: phalp2_30772)
Protein name
8yRd
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MSALTRRIVLAAIIFLVFLMIPKRISGSTIRPVRSTQVHIVQEDSLQLWIDKLAKAERCPAKGIIDSNHKMSYGCLCFQKETFIRQTRLYLMPHATNEEILSKIGNCQFQKKLAYEMIKARPSNTKHWYLSVKKIGNYKASKKN
Physico‐chemical
properties
protein length:144 AA
molecular weight:16627,6 Da
isoelectric point:10,06
hydropathy:-0,22
Other Proteins in cluster: phalp2_30772
Total (incl. this protein): 3 Avg length: 140,0 Avg pI: 7,00
Protein ID Length (AA) pI
1KoNj 135 4,99486
4iNcn 141 5,94783
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_17923
UMZJ
 12 47,0% 102 1.785E-26
2 phalp2_22614
1MavD
 11 44,0% 93 3.458E-20
3 phalp2_16707
Ilfh
 7 42,2% 97 8.880E-20
4 phalp2_33867
1FC4O
 1 26,7% 116 6.961E-12
5 phalp2_29073
6SdDJ
 10 34,0% 97 1.068E-07
6 phalp2_34952
4Dsud
 16 24,4% 131 2.740E-05
7 phalp2_22465
11oot
 1 29,0% 117 3.723E-05
8 phalp2_25299
8rpez
 24 24,6% 130 5.058E-05

Domains

Domains
Disordered region
Unannotated
Protein sequence: 8yRd
1 144
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
8yRd
Method AlphaFoldv2
Resolution 85.11
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50