Protein

Protein accession
4yMfd [EnVhog]
Representative
4FqbY
Source
EnVhog (cluster: phalp2_4672)
Protein name
4yMfd
Lysin probability
69%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MNYPKFIDVSDYQPVLTAADLKGHINALACKACEVDDQAWGVGDSVDKFCDPKLADNVELAYLLNIPCACYIFDNPNYTSVNGGSWQDHKLHPNSGDPRMLALRQALKNKTYHAICIDVERWWVRYNEYYSNPGTALRIPPLWIRDSAADLMQRIKEDQAAGILRQVPIWIYTAKWVVDAYSPELDTFLANQIQWLADYTTPVYTGSKGKVMTWEALSTLIDAQSFNPKWVGNKRAEMLQLTDAVTVPGIYNTAGAARPVDIDVSLVELAKVFAPGEWSGVTPPPPPVVPPVVPPVDLAPIIARLAEAEARVKALEDWKARVQA
Physico‐chemical
properties
protein length:324 AA
molecular weight:36051,8 Da
isoelectric point:5,10
hydropathy:-0,15
Representative Protein Details
Accession
4FqbY
Protein name
4FqbY
Sequence length
334 AA
Molecular weight
38131,04930 Da
Isoelectric point
5,28361
Sequence
MTSVWKDYPIGIDLSHYQPNVDWDYLKQYISFAVAKCGEVQEGISEDKWYDQGFSEKIQGAYDAGIPMGAYIFANPFAVIAKFGNGVSLDALKNLKPADNPEYTKLVEWLSGKLYYFIAVDLERWWDNYNQYYQFQNHIITQDQVKVISSQWIMAEFTKLLEHIAYGKANKTLRDVPVVVYTGDWFAKGYCMQGTDNMFYDWAAHAEPTYSLWTANYPTLPSTLTWEALKANLPNGVTQKPNHLNFANVLFWQFKINTLPNGKYANTTFDVDLSLKSKDALYQWMNFTPVAPPVVVPPVVVPPVVPPVVIPPTPEPTTLEARITAIENWIKKPL
Other Proteins in cluster: phalp2_4672
Total (incl. this protein): 4 Avg length: 330,0 Avg pI: 5,00
Protein ID Length (AA) pI
4FqbY 334 5,28361
40nYQ 337 4,87800
5sTsj 325 4,73056
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_6394
5NLU
 30 28,9% 297 1.777E-30
2 phalp2_346
6XqcU
 5 21,6% 314 5.312E-23
3 phalp2_34274
3i9iA
 2 23,8% 302 5.053E-20
4 phalp2_23471
6Lb2g
 1 22,7% 352 1.231E-19
5 phalp2_20360
2RVWF
 69 24,5% 253 2.886E-12
6 phalp2_5862
5yfd0
 6 25,8% 290 2.167E-11
7 phalp2_4374
2ccox
 4 19,5% 307 2.889E-11
8 phalp2_35888
4RkER
 1 22,0% 259 1.214E-10
9 phalp2_13649
5ElMc
 11 22,2% 305 3.818E-10
10 phalp2_30061
2NCcc
 23 23,3% 300 2.823E-09

Domains

Domains
Unannotated
Unannotated
Representative sequence (used for alignment): 4FqbY (334 AA)
Member sequence: 4yMfd (324 AA)
1 334 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
4yMfd
Method AlphaFoldv2
Resolution 53.35
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (4FqbY) rather than this protein.
PDB ID
4FqbY
Method AlphaFoldv2
Resolution 57.47
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50