Protein

Protein accession
4t4t2 [EnVhog]
Representative
nGdG
Source
EnVhog (cluster: phalp2_38317)
Protein name
4t4t2
Lysin probability
98%
PhaLP type
endolysin
Probability: 97% (predicted by ML model)
Protein sequence
GDTITREDAELQLQKNIDDRLVQIRQAIPEFDNLPLEARKHLLGSWFRGSLSGSPKTISLLNAGRFEEASDEFLNNDEYRTTSLGGVKKRMKATSDAIRGLI
Physico‐chemical
properties
protein length:102 AA
molecular weight:11445,7 Da
isoelectric point:5,84
hydropathy:-0,59
Representative Protein Details
Accession
nGdG
Protein name
nGdG
Sequence length
106 AA
Molecular weight
11918,11850 Da
Isoelectric point
5,06682
Sequence
VQPGDTITKEQANVQLQNNIDERLVQIRQAIPEFDNLPLETRQHLLGSWFRGSLSGSPKTISLINEGRFDEASQEFLNNDEYRTTSLGGVKTRMNDTANAMRGLIT
Other Proteins in cluster: phalp2_38317
Total (incl. this protein): 7 Avg length: 129,9 Avg pI: 5,75
Protein ID Length (AA) pI
nGdG 106 5,06682
2ZacI 143 5,36744
32JMO 137 4,51889
6NL3E 128 5,36443
85xW9 157 4,49587
8zQ0l 136 9,58285
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_20206
81gIU
 77 42,9% 107 9.394E-31
2 phalp2_22925
352fH
 3 42,1% 95 6.180E-19
3 phalp2_11962
2UHs5
 10 33,0% 100 3.778E-17
4 phalp2_18749
XXzE
 9 32,6% 101 4.560E-12
5 phalp2_2632
6RhYr
 14867 27,2% 99 6.674E-06
6 phalp2_2924
QDRo
 8927 26,4% 102 2.347E-05
7 phalp2_35194
6eydM
 4 26,8% 108 6.022E-05
8 phalp2_32797
2yPO8
 5731 25,0% 100 8.243E-05

Domains

Domains
Unannotated
Representative sequence (used for alignment): nGdG (106 AA)
Member sequence: 4t4t2 (102 AA)
1 106 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
4t4t2
Method AlphaFoldv2
Resolution 95.30
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (nGdG) rather than this protein.
PDB ID
nGdG
Method AlphaFoldv2
Resolution 97.20
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50