Protein

Protein accession
1d7Ym [EnVhog]
Representative
1d7Ym (this protein)
Source
EnVhog (cluster: phalp2_18797)
Protein name
1d7Ym
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
LPSNGRLDTTGLVTGAGFRPIEAGAGGLLRPDVAHQHNIMAEAFQRDLGEPLVYSEGYRPLARQSLKWAQYQRGGTLAAFPGTSTHGLAVTIDYASGVGYAGTAASNWMDKHGPAYGFVADVPSEGWHRHFAVTPTITRTPAPAPVTTEPEEELDMLILSTSKGQGLLTDSALVSFTSADDVRAFGMAGVKSVVVTDKFYAKLSERLNR
Physico‐chemical
properties
protein length:209 AA
molecular weight:22262,7 Da
isoelectric point:6,07
hydropathy:-0,18
Other Proteins in cluster: phalp2_18797
Total (incl. this protein): 2 Avg length: 210,0 Avg pI: 6,16
Protein ID Length (AA) pI
3OD4w 211 6,24180
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_10718
3dDL5
 4 40,2% 139 6.650E-25
2 phalp2_24216
2MA1I
 2 32,3% 207 1.862E-20
3 phalp2_16795
1fUAC
 13 29,5% 203 1.310E-10
4 phalp2_18182
4DXPs
 4 31,7% 148 1.976E-09
5 phalp2_37401
2k3oz
 5 31,0% 174 1.197E-08
6 phalp2_37143
1r1gj
 3 32,1% 137 1.197E-08
7 phalp2_16194
4ErvX
 37 33,1% 175 9.706E-08
8 phalp2_8801
2h9BX
 3 31,1% 202 3.196E-07
9 phalp2_9106
5GTdJ
 17 29,5% 166 3.430E-06

Domains

Domains
PET_M15
Unannotated
Protein sequence: 1d7Ym
1 209
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF02557

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1d7Ym
Method AlphaFoldv2
Resolution 87.02
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50