Protein

Protein accession
4pdzA [EnVhog]
Representative
5J3DT
Source
EnVhog (cluster: phalp2_6184)
Protein name
4pdzA
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
VTNWRDIGDVTFARWQGELMRLRSPLVAEARATYDAARPHSALALAMAFHESKYGTVYARNVATNRNVHNLRPRGAGGFQTFATWADGVDEWRQRVTDPTYAYARTTTLQDLLGVFAPSSDGNNVAAYVQTVQAMLDGWQLEESSMEQWPKIVNDTWPAIVLTAGHRSDNDTGNPAEKARTPLLAQAYKRAFEGAGFTVYYWQSMDGDGRPDQSPGGLDGVGRGVGRLMASIAGPSVLFDLHFEGAAARGVFAIVPDVTGLRTAVANGAPADDTWAQNKDDIGLARLVSQYIAAATGLPLRQTTEPGVMSERATGVGSQGYRLGMLAYTAANRKRSPRLVVEHGNLSSSADLRIIDTPGFYDKCASAALRAVREMYSTPVVPPAPVYIEPGPMPSTMGHDSNIGGVTFWTCVRDVRANEGARWRQYADVTSGETRAPAKPGGEGFRAQWAVQGTDGAWWWVTERGSRIRCADCDVRVAFTRAL
Physico‐chemical
properties
protein length:483 AA
molecular weight:52452,1 Da
isoelectric point:7,19
hydropathy:-0,33
Representative Protein Details
Accession
5J3DT
Protein name
5J3DT
Sequence length
487 AA
Molecular weight
52951,79660 Da
Isoelectric point
4,90455
Sequence
VTSLTPESPWRTSGDTTLAAFAAELAGSPVAAEADVLCDLADPYGRLYLAHSKIENQHDTVGILIDPGMHNNLALRPRGYPEELGTRNGFAVFPRYQDCLTAWRRRLSDVRLCYLDAVTMLEYSTCYNPASDTHPVTGVVNDPVRYCNRLLTTINRLPEEGAPPMAEPQNIVVVAGHRSTGDPGNPSEKERTDDLARAYRDALRAAGHEVWWLQENDGDADPDDTVGGLDTVGRRTLALCESVGATLMLDLHFEGHGNTSVRGCFAIVPDVTGLTTAVPGGAPPHDTWANNPLDQKVGRALTEAIRSQTGIPLRTGIREPGLMDEGETGVGAQGFRLAMFAYTVPRQPEMVRLVVEHGALTNPQDRAIIDAPGFYQKVGQAAVMAVNTVFGAPEVPDEPDPPTDELAYPPGWDALVAAEVWGTAYSPDWDFNPAGVVSRIYIDERVCSRLIYRLRQPGGRDLFVFTSGHTIGRLADTESYRVLAKPK
Other Proteins in cluster: phalp2_6184
Total (incl. this protein): 7 Avg length: 476,6 Avg pI: 6,19
Protein ID Length (AA) pI
5J3DT 487 4,90455
1eFUF 484 5,95391
53NWq 476 6,24049
7VvBl 477 6,56834
jo4l 450 6,79296
t5BG 479 5,69461
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_25120
1r13I
 5 31,7% 387 3.539E-39
2 phalp2_3886
6Rlv5
 7 24,7% 360 3.644E-22

Domains

Domains
Unannotated
Ami3
Disordered region
Representative sequence (used for alignment): 5J3DT (487 AA)
Member sequence: 4pdzA (483 AA)
1 487 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01520

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (5J3DT) rather than this protein.
PDB ID
5J3DT
Method AlphaFoldv2
Resolution 79.32
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50