Protein

Protein accession
4kidM [EnVhog]
Representative
3dXJR
Source
EnVhog (cluster: phalp2_39188)
Protein name
4kidM
Lysin probability
99%
PhaLP type
endolysin
Probability: 93% (predicted by ML model)
Protein sequence
MPNARSFIVYMGRYYAKNGYKETGTNHQQFSDLVNAYGLKGYQDQPWCGTYQMALELMAFGKDAALKHWNMTAKTYCGFSVFDTEAKFQKAGKTGTTPKVGALVIFKQSHMGRVISVSTKNKTFECAEGNSGDACVVKTYKFTDASIKSYCLIDYGDDNLTKEKILCAINATYEMAHNLKWAYSDSHAIPPCIPDKRISCDRLEALACFMLGYTNQQAGGFVCSNMEKMLTSWGWTKITKQSELQGGDFILFYRDGETTATAKSHAFTLTYYNSPNDIGKYDTGWSTRIAAKQPYSKVKFDEWADRHFYAGFRAPYAGDLDGTYVFESAVNRGFCIDVKGASTA
Physico‐chemical
properties
protein length:344 AA
molecular weight:38464,1 Da
isoelectric point:8,48
hydropathy:-0,39
Representative Protein Details
Accession
3dXJR
Protein name
3dXJR
Sequence length
454 AA
Molecular weight
51207,52640 Da
Isoelectric point
9,16536
Sequence
MPNAKSFIIYMAKYYAKTGYTEGKNNWNQFSDIVNRYGLKGYQNAAWCATYQFALELMAFGKAEALRHWNMTARDYCGMSVFDTEKRFISARKTSTTPQIGALVIFKRSHMGRVISLNKSKKTFECAEGNSSDKCVVKTYSWTDASIKSFCIIDYGHDLLTPEKILGALNAVYEMAHNLGWVYSDSQTIPPCVIDKRVACDRLEALACFILGYTDQQAGGFVTSNMERILTSWGWKVIKDQSKLIRSDFALFYKDGQSTATWEAHAFALTYYKSASNVGKFDLGSDDRIKAAQPYRNVPIDQWENRHFYAGFRAPFDSHVIESAVNRAYCIDVKGASESNRANVQCYKKNGTTAQDFILEPVGSYYTITNVKSGMVLDVSGAKVENKRNVWQYTKNGTKAQLWKMLKNSDGSVTFESALNEGYALDLSGAIARNGRNIYLYKKNGTAAQKWFLN
Other Proteins in cluster: phalp2_39188
Total (incl. this protein): 2 Avg length: 399,0 Avg pI: 8,82
Protein ID Length (AA) pI
3dXJR 454 9,16536
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_17250
3TEkG
 7 46,0% 345 6.959E-99
2 phalp2_26133
a5Py
 7 20,6% 432 4.058E-09

Domains

Domains
RicinB_lectin_2
Representative sequence (used for alignment): 3dXJR (454 AA)
Member sequence: 4kidM (344 AA)
1 454 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF14200

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
4kidM
Method AlphaFoldv2
Resolution 90.43
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (3dXJR) rather than this protein.
PDB ID
3dXJR
Method AlphaFoldv2
Resolution 91.65
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50