Protein

Protein accession
4kDgG [EnVhog]
Representative
1gpdu
Source
EnVhog (cluster: phalp2_4059)
Protein name
4kDgG
Lysin probability
99%
PhaLP type
endolysin
Probability: 98% (predicted by ML model)
Protein sequence
MKTLDWPDVPYIGPATGCTSGRPDGRPVLGLLHCTANDATPTQEATYAHTRAASSNPTSAHLYAGDASPSLVQGVAVGDCAWHAGGHFGNRRGVGLEITGQVSWSRSRWLRGQTIPAAARAVRLLSDKTGIRMRWLDRAGLIELYEHPTLAHSGWVTHYQYNQWCPDAKSDHNDPGPGFPLDLVMQLAIEGDDMSAADVVAGLDEAVSWRSTGIRNGAVAAGWSSEVSSRALLEYVFGRTVLGPSTAEVETQVAGLTAAIQALAAGGSSVDTAAVIAAVNAQAAETRSQILTRLAAAGTGLTGG
Physico‐chemical
properties
protein length:304 AA
molecular weight:31736,1 Da
isoelectric point:5,82
hydropathy:-0,11
Representative Protein Details
Accession
1gpdu
Protein name
1gpdu
Sequence length
304 AA
Molecular weight
32873,76740 Da
Isoelectric point
5,50550
Sequence
MMTDSPDFPGEGISYIGPAYGSNAHDPANQRMLIVIHCTANDATPTEEATYAKNRRDSSPTSAHFYAGDFSPALVQGLPLSRDAWHGASHVPNQHGYAVEVTGQAYWSRSTWTADMRDIQATAKAVRLMAQRSGIPLRVLTTEQLLYFKDHQTLTNGGVCTHAQCTTVFGGTHTDPGPGFPMDLVVSLAQTGGNGTMLSAQEYALLELASERVLVLVRMIANLHEVDDRKPSEPNLLRAYLMEMMSKLDTLVSRPVSSVQLSQADIDAIAGQVALSVQSSLTNLQTDLALVMDKLRATGVTLSQ
Other Proteins in cluster: phalp2_4059
Total (incl. this protein): 3 Avg length: 304,0 Avg pI: 5,63
Protein ID Length (AA) pI
1gpdu 304 5,50550
4kxtx 304 5,57706
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_21936
4OI93
 1 35,0% 191 1.082E-18
2 phalp2_18539
6X9wu
 16 29,1% 271 1.965E-18
3 phalp2_590
Z6PR
 9 34,3% 204 2.132E-17
4 phalp2_7739
6UXdw
 5 33,0% 203 5.201E-17
5 phalp2_12455
wuLO
 26 29,6% 199 8.985E-12

Domains

Domains
Ami2
Unannotated
Representative sequence (used for alignment): 1gpdu (304 AA)
Member sequence: 4kDgG (304 AA)
1 304 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01510

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
4kDgG
Method AlphaFoldv2
Resolution 74.47
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (1gpdu) rather than this protein.
PDB ID
1gpdu
Method AlphaFoldv2
Resolution 76.82
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50