Protein

Protein accession
1bdGM [EnVhog]
Representative
1bdGM (this protein)
Source
EnVhog (cluster: phalp2_1349)
Protein name
1bdGM
Lysin probability
99%
PhaLP type
endolysin
Probability: 95% (predicted by ML model)
Protein sequence
MTDDSTTPWCGIGLAGIMDEVGLSSLIPPLPFRAASWMSVGFDSEPRPGAIVVFPRQGGNHVTVIRSVEGHIWRCIGCNQSNAITTTTFDGRQARACRWPGQKQVPTLPALPPNASNRYTALIRSMKVRHTWVTRIDEEARRRLSHKERYKVIERATGIPWAFVAALHYREDSTGRFDTALHNGDKVIGNGKLTYRVPAGRGPFETWEDAAIDALQMKGFHNADDWNIEAICERAERYNGLGYRTNNLGPSPYLWSGTTHYERGKYDFDGHYNATLTDAQIGVIPLITRIMELDNEGRFRDGSRKLNLIAWVRRFIKAIMAAIGSIFTLDNLYSTKEFLAPLKDMFTLQSLVVLAVSGIGVWVLINTLDRMMMEDGKDGRYVPSKIDAAAGEAADVLQEATDERNS
Physico‐chemical
properties
protein length:406 AA
molecular weight:45365,0 Da
isoelectric point:7,69
hydropathy:-0,31
Other Proteins in cluster: phalp2_1349
Total (incl. this protein): 4 Avg length: 429,8 Avg pI: 7,75
Protein ID Length (AA) pI
1IuaJ 454 8,53428
2S6NZ 451 6,08123
4LMOV 408 8,70183
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_8476
1blHe
 4 43,1% 276 7.481E-88
2 phalp2_7055
8pP1x
 17 42,9% 277 7.927E-73
3 phalp2_30663
6NbA2
 8 39,1% 276 1.897E-62
4 phalp2_32683
80YIo
 2 34,5% 278 1.368E-47
5 phalp2_21306
1Edea
 3 24,6% 397 1.554E-23

Domains

Domains
Unannotated
Unannotated
Protein sequence: 1bdGM
1 406
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1bdGM
Method AlphaFoldv2
Resolution 75.69
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50