Protein

Protein accession
88cVm [EnVhog]
Representative
88cVm (this protein)
Source
EnVhog (cluster: phalp2_8688)
Protein name
88cVm
Lysin probability
98%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MFANDWRIRKPAGAGNGYRAFFRAAETLGDHMLKESTLMRAFRFTMDAEGGATYTNDPRDPGGPTKYGVALNFDRGSIPDKDGDGDVDARDVQLLEEADALVIYRDRYWRPGKCDALPDALALAHADTLYNIGPGAAPRILQRAVNACGLGIAVDGKIGPATITAICSLEDDGRLGDLLRAQAAERLYYYRTRPGWPVYGRGWQARTQRCFDTCMALAVATQEATDKDSNSSHGKAAGEGAVAIRKPDKRANGYRAMLGGE
Physico‐chemical
properties
protein length:261 AA
molecular weight:28309,5 Da
isoelectric point:6,84
hydropathy:-0,48
Other Proteins in cluster: phalp2_8688
Total (incl. this protein): 11 Avg length: 226,6 Avg pI: 7,39
Protein ID Length (AA) pI
3phJ9 190 7,61463
3uXkJ 190 6,15722
3uma4 221 8,32572
3vDdS 190 5,48544
3xuUz 230 6,18126
7Bumf 230 8,29555
7s4nm 190 6,83264
8aDyd 265 8,49734
8eNYJ 261 9,34716
8jmMX 265 7,73013
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_37851
4LyyS
 5845 37,9% 174 7.815E-40
2 phalp2_14059
8aO3S
 400 34,9% 186 1.268E-33
3 phalp2_12946
360Ik
 1926 35,4% 175 2.815E-32
4 phalp2_23756
YFA5
 85 39,5% 182 1.371E-29
5 phalp2_2279
4BZyV
 20 38,0% 176 6.421E-29
6 phalp2_12184
6C2VC
 988 39,1% 171 1.191E-28
7 phalp2_4978
6Oe3B
 241 35,2% 213 1.191E-28
8 phalp2_20698
4XKIk
 408 34,2% 184 3.005E-28
9 phalp2_13836
7fGjh
 493 40,4% 168 1.911E-27
10 phalp2_30515
5lEwY
 188 36,1% 166 8.919E-27

Domains

Domains
GH108
Disordered region
Protein sequence: 88cVm
1 261
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF05838

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
88cVm
Method AlphaFoldv2
Resolution 79.49
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50