Protein

Protein accession
4dqjB [EnVhog]
Representative
3YRiM
Source
EnVhog (cluster: phalp2_10808)
Protein name
4dqjB
Lysin probability
97%
PhaLP type
endolysin
Probability: 98% (predicted by ML model)
Protein sequence
MKLLNKIKNSLKDGSKSIEFGLGGGAIMLFVVGLVIAIIAIANWGALNQPQRPWGYEYREDKLLNRIYKRKWYRLRKPQQVLSPLAQEVIEDTPSDLSELELLIRSMWGVEHFVVARALAVCESGMSPLAINWDSKDVGLFQINLPTWEELVLKEFGYTRADLLDPYKNTAVAHWIWDRADGEIGNGKGSWEPWVALGNECFMAEL
Physico‐chemical
properties
protein length:206 AA
molecular weight:23391,8 Da
isoelectric point:5,53
hydropathy:-0,11
Representative Protein Details
Accession
3YRiM
Protein name
3YRiM
Sequence length
180 AA
Molecular weight
20262,00250 Da
Isoelectric point
5,93481
Sequence
MNKSPRRKVLIGAMFLIVGGALFGAFLAVSSWYDSNKIIPPYLQVNVESGWFRVEKRPLLTPIVQVTLEYPVTVDTPIKEYVCKKFEERCKEALAIVQCESGWKEDALGVNDPSVGWSARADAGLFQINSQHWPEVGGLTAMLDPYKNTDVAHQMFEASGKTWNAWFAHGTPCYEENLYK
Other Proteins in cluster: phalp2_10808
Total (incl. this protein): 2 Avg length: 193,0 Avg pI: 5,73
Protein ID Length (AA) pI
3YRiM 180 5,93481
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_28733
4HdMB
 56 37,7% 135 2.446E-17
2 phalp2_22759
8rPUg
 6 25,5% 176 4.774E-15
3 phalp2_11970
2XgcV
 3 26,7% 198 3.129E-10
4 phalp2_13392
4kzMA
 9 32,3% 133 1.654E-08
5 phalp2_15093
92pq
 1 25,9% 135 3.140E-05
6 phalp2_4037
19be8
 11 30,3% 158 2.537E-04
7 phalp2_31657
4GV6b
 7 29,9% 117 6.190E-04

Domains

Domains
Disordered region
SLT
Representative sequence (used for alignment): 3YRiM (180 AA)
Member sequence: 4dqjB (206 AA)
1 180 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01464

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
4dqjB
Method AlphaFoldv2
Resolution 70.14
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (3YRiM) rather than this protein.
PDB ID
3YRiM
Method AlphaFoldv2
Resolution 81.00
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50