Protein

Protein accession
1atrm [EnVhog]
Representative
1atrm (this protein)
Source
EnVhog (cluster: phalp2_35582)
Protein name
1atrm
Lysin probability
66%
PhaLP type
VAL
Probability: 99% (predicted by ML model)
Protein sequence
MTDLPDISVELEAKISKFLLNMAIVKRAIRDVYSTAQREALTASAKSLQGSTFKKLSDQAVKDMLKQVEKDSAAAGQASGRNWINAFKKELKGEKVGKNVPNWLPWIGAAMPVAPAAMTGAVGILGALGVAGLGAAAGLGAFALAAKEVLSPVQTAFTALDNVSKSIPANATALQIWLAAGSTTRTTATGKVRVSTNTLGPGLGFLANPHINYGMLTPAQQKALVLQYQSMTGLPTSEKAQITALMAQRRAYLPLSGPQRGALSQTQLFDSRLVSAQQAAAPAILGLYGAALSALGPALKYITPLANIAAGALMPLVKEIGSGIKSQGFAQFMLIVERMAKLGISSFGQSIINFAIGIGHIFAALANSGVVRVVTTDLLKMSAAFRKDTLPSNKGFMTFIADMKQNAPTVAAILRNLVAILGNLFKALGGGIGAAELKGLNDVLGFINMLSRIPSIGPLIYNLIALSLIFSKLGTLRLITASLEFLGKGLATMALLKLGPLIGGMLGLDVAGLKLGEMWKTIGKAMLTFSVNLIKSFAQMVASGAVWVAKSIAQGAVWVAGMIARAAVVVATNVAAALATAAAWVAANAAMIIASGGIILLLAAIVIGVYELYKHWGAVWGFIKKIAKEAWDFIWNGFGKFLLPLLGPVGLLALGIIEVWKNWKTIWGFITSLVHAAWDGKFGVRTITLEALKNILDVFFAWGKGFLRIAADAFGWVPGVGPKLRAAQKDLSAFETSTNRTLDGLIKNRTANVNFKFGNVPPNLAIPSSYAGGTGGARAGWAWVGERGPELVNMRGGETVIPSHVSMGYADGTTGWPPVTGYIPSGPQWHGLMTGISAGISLVDRRLAVALNKEHARAMAAAGPGGGAPAANAALARRLYPMYASGPVWDAWNYVEMREAGWNQFATNPSSGAYGIPQALPPTKMPFAAQRAGGSNPTAQIRWMWNYMAGRYGGPIGAAAHERAFNWYGDGGFMPPGSYGIVGERGAELVQAGRHGATITPGPITPGPIVHHQEGKLVHVTVYTNEIRPQYHAAMLGWELARRSAF
Physico‐chemical
properties
protein length:1046 AA
molecular weight:109999,1 Da
isoelectric point:10,04
hydropathy:0,30
Other Proteins in cluster: phalp2_35582
Total (incl. this protein): 7 Avg length: 1114,3 Avg pI: 9,93
Protein ID Length (AA) pI
1dXTH 814 9,99397
1e1FD 1406 10,32134
252H1 1164 9,69890
4EIlU 1043 10,06321
6FtOV 1036 9,74570
6XuIV 1291 9,66035
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_2287
4ElMe
 20 22,6% 1109 2.754E-50
2 phalp2_31786
4dzYr
 6 24,3% 834 2.565E-49
3 phalp2_10370
1Ifz3
 14 25,8% 755 1.045E-41
4 phalp2_647
1fSUn
 1 19,7% 884 2.289E-19

Domains

Domains

No domain annotations available.

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1atrm
Method AlphaFoldv2
Resolution 44.88
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50