Protein

Protein accession
4YJDu [EnVhog]
Representative
3Y8Oi
Source
EnVhog (cluster: phalp2_5575)
Protein name
4YJDu
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MMTPAQFYASYDETDPFGSYKDRDPNGPGHLGSDFIWPAGTEIPSWVAGEVVRVGFSASLGYYVVIQRDGGGYALFYHLYQAAAVRLGDRVEFGQLIGLVGNTGTLSRGDHLHVGFSPDDPTPGTGSVVDPWPLILDSILNPTPLSESEIDMTQLNYIALVDEKGKRIKYGIFGQTIPGGCEIVDPKDITTAQAYGDLAGTRIYRPDNGLPVRVGAPLKDVQRAEWDALVVTSARLSRNYFAALGQAIAQAVKA
Physico‐chemical
properties
protein length:254 AA
molecular weight:27396,5 Da
isoelectric point:4,86
hydropathy:-0,13
Representative Protein Details
Accession
3Y8Oi
Protein name
3Y8Oi
Sequence length
240 AA
Molecular weight
26223,29800 Da
Isoelectric point
5,87922
Sequence
MTPTTFYALIGSVFGWSHEYGPRFHAGQDYPWGAGTKIPSPGAGRVVSRGYQLAAGYFVVILIDGKYFLFYHMKHWTDLQVGDVVAYGDTVGLVGSTGDSTGPHLHLAVSNSPIPGLGTRVDPRPIVESLLADHELAAGDQTPFPSIEEMEDEMLWIFYQPKNNSSPGTGGISRIWAGTREVGGILYADVWGVSPNGEARRLTRKHWVDLYRAAEKAQKPLTVIGCTGNELEQIVYARSL
Other Proteins in cluster: phalp2_5575
Total (incl. this protein): 2 Avg length: 247,0 Avg pI: 5,37
Protein ID Length (AA) pI
3Y8Oi 240 5,87922
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_11348
7sGwF
 5 30,0% 213 7.104E-14
2 phalp2_3069
23Hwh
 18 29,2% 164 1.438E-12
3 phalp2_28943
5FpkK
 1 29,0% 165 2.870E-11

Domains

Domains
Unannotated
Unannotated
Representative sequence (used for alignment): 3Y8Oi (240 AA)
Member sequence: 4YJDu (254 AA)
1 240 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
4YJDu
Method AlphaFoldv2
Resolution 68.60
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (3Y8Oi) rather than this protein.
PDB ID
3Y8Oi
Method AlphaFoldv2
Resolution 68.64
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50