Protein

Protein accession
4VY3y [EnVhog]
Representative
3ibDa
Source
EnVhog (cluster: phalp2_12980)
Protein name
4VY3y
Lysin probability
99%
PhaLP type
endolysin
Probability: 93% (predicted by ML model)
Protein sequence
MIKSWVACFKRPSKETRYGDSQVFIDTKNNICFIVDGGDGECALRLISYLKENNIKKVYLLLTHPHSDHGDGLRKIIKDSYFTVLCFYCYDPNSLKKGLSNNRGSNSVREDIDYLNRMISEAKDRDIEVKYLVHGDKVELGDIKFNVYREQPSKVEDDDTYGWSYVNDGSLCLYFPDLYYWTSGDGSERIWDFIKKLGLTVKFFKIPHHGNNCPQSQANGLKSHGANLCWYNDLEPNGVGTNDFTLYGARRCKEAGITVIDCIGSDINMTFAMGKATITKGSSSWNYTIPYNGGYLEGWVIDSNGWRYRYKDGTWAVGWALLKWSKGENWFYFDEHGYMVTGWQYLKWSKGWSWFYFDKTDGYMKTSWVYDDNNWYYLNPTNGYMQTGWLDYNGRKCYLEPVSGKNQGHAYRSVTVKIDGETWQFDDNCYGTKITNTTAFTKRTVIDISQFNNVTNWSAVKATGYPVIIRIGYRGSKTGAITYDPKYKEYRSACEKYGIEHGFYFFPCSITDAEAHEEALFIKNEVIKSGIAMPVYLDSEVVQRDKSGRSDNLSKEKRTRMLKIICDDLLKWDIPVGIYASRSWLYNNLDMSQFATDTNENTWVAEYGVDATKYTGIYVMWQYTSKGSVNGISGNVDMSYQYKPFHLVKTSVNQVIETSAPVKIEKSELEKVIEVAKSDLGYLEKALKYKNNKEILYDKTKGASDENTTKHWFEIKPEWQGQPWCCCFITWVFTKALGKERAKELLKHYPYVYCPTLAGLFTKYSTPQVGDIVIFWKNGAYAHTGLVIAVSGNTFTTIEGNTSGASSVVPNGGGVCQKTYNLRDVNAKFCRPAYSSTAITSDANKVVVSDDMHSVKWKGYVNIGRNTKLAVRLQPNISAKECSFSGLKQGTEVGVSHEQGDWYLIKYDGKFGYVQKQYISKTKISEVSNPDPVTDDIHTVKWTGVVNTNGGTLNVRTQPNSSANTCSFSPLRKGTEVGVCSQSGDWYLIKYNGKYGYVYSSYVKRK
Physico‐chemical
properties
protein length:1006 AA
molecular weight:114569,8 Da
isoelectric point:8,56
hydropathy:-0,51
Representative Protein Details
Accession
3ibDa
Protein name
3ibDa
Sequence length
1001 AA
Molecular weight
113936,07440 Da
Isoelectric point
8,43267
Sequence
MIKSWIPSFGKPSKETRYGDTQVFIDTKNNICLVIDGGLGKCSTRLISYLKQNKIKEVYLLLTHPHNDHGDGLLDIIKDSYFTVMRFYCYDSDSLKKGLRNNKGSDSVRDDIDYLNDIIYEAEKRKIDVQYLVHGDKVELGDIKFNVYREQPSRVEDNDTYGWSYVNDGSLCLYFPDLYYWTSGDGSDSIWDFIKKLGLKVKFFKIPHHGNNCPKTQANGLKSGGAELCWYNDLEPRGVGTNDFTLYGARRCKEAGITVIDCIGSDIEMTFAMERATIMKGGSIWTYEIPYSGEYQEGWVKYPKGWCYRYKNGAWAIGWKTIFWQGAIRVFYFDEHGYMATGWKYLKWEKGYSWFFFDKTNGDMKTGWIYNNNFWYYLNPTDGHMQTGWLDYKNKKCYLEPASDKNQGHAYRSVTVMIDGETWQFDDNCYGEKVTASAFVKRTVIDISQFNNVTNWSAVKAVGYPVIIRIGYRGSKTGTITYDPKYKEYRSACEQYGIEHYFYFFPCSITDAEAHEEALFIKNEVVKSGVQLVYLDSEVVQSDKSGRSDTLSKEKRTRMLRIICEDLLSWGISCGVYASRSWLYNNLDMSNIPSNAVKNTWVAEYGVNATKYTGTYVMWQYTSKGSVNGINGNVDLSHQYEPFYFIVNNSSSQADGIDSEPKKEITKSELEKVIEVAKAEIGYLEKKSNSQLDSKTANAGDRNFVKYWSVKPEWNGAYWCAAFICWVFTEALGKQRAKELLKHYPYVYCPTLAGLFTKYSTPQVGDIVIFWKNGEYAHTGLVIAVNGNRFTTIEGNTSGASTVVPNGGGVCQKTYNLSDVNAKFCRPDYSSTAITSDANKVVVSDDIHTVKWKGYVNIGRNTKLAVRLQPSTSAKECSFSGLKQGTEVGVSHEQGDWYLIKYDGKFGYVQKQYISKTKVSEISNPDPVTDDIHTVKWTGVVTTNGGTLNVRLQPNSNAKTCSFSPLRKGTEVGVCSQSGNWYLIKYNGKYGYVYSSYIKRK
Other Proteins in cluster: phalp2_12980
Total (incl. this protein): 3 Avg length: 1004,7 Avg pI: 8,64
Protein ID Length (AA) pI
3ibDa 1001 8,43267
7JBdF 1007 8,91296
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_25237
40EaA
 18 30,7% 823 1.079E-101

Domains

Domains
Unannotated
Unannotated
Unannotated
Unannotated
GH25
CHAP
SH3_3
SH3_3
Representative sequence (used for alignment): 3ibDa (1001 AA)
Member sequence: 4VY3y (1006 AA)
1 1001 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01183, PF05257, PF08239

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
4VY3y
Method AlphaFoldv2
Resolution 75.44
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (3ibDa) rather than this protein.
PDB ID
3ibDa
Method AlphaFoldv2
Resolution 79.73
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50