Protein

Protein accession
4ThmD [EnVhog]
Representative
2CQZE
Source
EnVhog (cluster: phalp2_26683)
Protein name
4ThmD
Lysin probability
99%
PhaLP type
endolysin
Probability: 96% (predicted by ML model)
Protein sequence
MNDNPYAMFLDQPSTTPSPQVNESSDSNPYSMFLNNSQTEDPISLIQKYFPPSEWSNAEKVMQAESGGKSNDVGDNYPINGQTIPSYGLFQIRALPGRPDPSKLVDPDFNVQYAANMWKSQGWEPWTTARKMGLPGTTPL
Physico‐chemical
properties
protein length:140 AA
molecular weight:15579,1 Da
isoelectric point:4,41
hydropathy:-0,79
Representative Protein Details
Accession
2CQZE
Protein name
2CQZE
Sequence length
106 AA
Molecular weight
12051,35770 Da
Isoelectric point
9,24781
Sequence
PTSQSTSQGGNQMGLIKKYFPQEEWQRAYNVMMGESGGRSDAVGDDYPINGVYAPSYGLFQIRGLPGRPKKEQLFDPEFNTKYAADMWRGQGWKPWHNTARKLGYL
Other Proteins in cluster: phalp2_26683
Total (incl. this protein): 7 Avg length: 120,9 Avg pI: 7,60
Protein ID Length (AA) pI
2CQZE 106 9,24781
2D1qL 150 9,72630
3XfQk 116 4,82412
41w66 104 9,35818
4fNp9 119 9,72533
4gHNF 111 5,89820
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_28236
t2PU
 13 51,8% 81 8.913E-34
2 phalp2_33305
6dOqy
 114 34,0% 97 7.113E-17
3 phalp2_32694
80mal
 4 40,0% 95 7.113E-17
4 phalp2_37679
3XmBc
 1 41,0% 95 1.339E-16
5 phalp2_37443
2Ld6Z
 8 38,0% 92 1.539E-14
6 phalp2_29789
1Ou3b
 5 30,7% 91 1.027E-13
7 phalp2_280
6DZVK
 1 32,6% 92 2.423E-12
8 phalp2_19507
3iTHv
 6 34,3% 96 2.423E-12
9 phalp2_20389
35wCc
 3 33,6% 98 3.324E-12
10 phalp2_32627
1Z5Rq
 1 29,0% 93 4.560E-12

Domains

Domains
SLT_3
Representative sequence (used for alignment): 2CQZE (106 AA)
Member sequence: 4ThmD (140 AA)
1 106 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF18896

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
4ThmD
Method AlphaFoldv2
Resolution 80.31
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (2CQZE) rather than this protein.
PDB ID
2CQZE
Method AlphaFoldv2
Resolution 91.62
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50