Protein

Protein accession
4T3fJ [EnVhog]
Representative
YdMl
Source
EnVhog (cluster: phalp2_38722)
Protein name
4T3fJ
Lysin probability
98%
PhaLP type
endolysin
Probability: 97% (predicted by ML model)
Protein sequence
MTWIFPERERVPSPHRYYRRRALGFPESVTSTLLILHYAVDGDQSADDDLDYNFIPRERQHDCMDVARSFQRPSRKASTHFVAGRDGSKVQCVPLDDGCWGAGDGGLSRFPDEIPSLLHSVPFRSRYVNLISTQIELCNVGYDVEKFRIPKEERITATHHAMNKPREWEMFTDYQYRTLELIVAMLRMAQPTLRWVCGHEDVTNRHTMAKKYGGKFDPGPAFEWHRIDWERYGFSRVQYDFETRSFLLVTEQDTKPIEVT
Physico‐chemical
properties
protein length:260 AA
molecular weight:30471,0 Da
isoelectric point:6,37
hydropathy:-0,64
Representative Protein Details
Accession
YdMl
Protein name
YdMl
Sequence length
209 AA
Molecular weight
23979,54100 Da
Isoelectric point
8,83876
Sequence
VRFEQFLWIPTSASSSRKGKEVIGVVWHWTGGWRDAEEVARKDYQRKKNRVSAHFSIGRDGTIVQSVETSRAAWHVAPGLNFMDGLGQANQRFIGVEMCNKGWLTEETAAKTEVHEGRHPNPRSRTTKWEDYTGKQWLAIQRLVDALQAAHPTIKYHCGHSDWYEDRAGAKLDPGPAFPWDHVKWPAETWPVTYEYGSKTWVHRLPESA
Other Proteins in cluster: phalp2_38722
Total (incl. this protein): 4 Avg length: 237,0 Avg pI: 8,37
Protein ID Length (AA) pI
YdMl 209 8,83876
4jOWe 235 9,25445
7Dmax 244 9,02701
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_4783
4YJpR
 19 32,4% 191 4.872E-25
2 phalp2_31152
3LHkO
 133 31,9% 169 9.589E-23
3 phalp2_2899
AiYm
 11 28,0% 203 4.523E-22
4 phalp2_11760
45aqa
 242 30,3% 178 1.191E-19
5 phalp2_31437
3j8r5
 5 29,3% 184 4.098E-19
6 phalp2_10215
PQuN
 6 27,0% 196 6.643E-16
7 phalp2_31608
4vh14
 28 30,6% 196 3.565E-14
8 phalp2_10807
3Y3O1
 11 24,5% 175 4.839E-14
9 phalp2_39806
zxOV
 15 31,1% 170 2.227E-13
10 phalp2_6246
6CITR
 5 26,9% 152 7.538E-13

Domains

Domains
Ami2
Representative sequence (used for alignment): YdMl (209 AA)
Member sequence: 4T3fJ (260 AA)
1 209 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01510

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
4T3fJ
Method AlphaFoldv2
Resolution 83.36
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (YdMl) rather than this protein.
PDB ID
YdMl
Method AlphaFoldv2
Resolution 93.80
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50