Protein

Protein accession
4Ss2i [EnVhog]
Representative
1rnvL
Source
EnVhog (cluster: phalp2_28393)
Protein name
4Ss2i
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MKELEIYRPMYTKRLTQGFGENKACIKTNVLKQPYRPFQVISAISNGLCSLGSTLFYPAIGMKGHSGLDFGAWMREPIFHSANFDGWAKVEKDMDGGLGVDIISNEPIFEYEGKKHYIKLRNWHCQEIIVHDGQQVKMGDPIALAGNTGASSGVHLHFGLKVCDKQGRNTIISGNGYYGAIDPAPYYYHEIMVRETLGLSQENLDTAQKLARVIYAFRGGLNSLLNK
Physico‐chemical
properties
protein length:227 AA
molecular weight:25350,8 Da
isoelectric point:8,56
hydropathy:-0,30
Representative Protein Details
Accession
1rnvL
Protein name
1rnvL
Sequence length
204 AA
Molecular weight
22953,34420 Da
Isoelectric point
5,45020
Sequence
MEKLFYWPVTRRGINQYFGENKACIDLATGTKTIACDGHNPPEGFKSVYSMMDGHNALDLYAERWQPVYAAREGFVREVETEPSRGLGIGIEHDFGSKGGRWKTRYWHLIALDAHYGDYVYTGQLIGYADSTGYSNGDHLHFEVKPLNADGSNAQQNNGYFGAVDPLPLMFDDFAPDVNTARMAIEKIAAWLDAFTDRLRAVRT
Other Proteins in cluster: phalp2_28393
Total (incl. this protein): 41 Avg length: 214,7 Avg pI: 7,84
Protein ID Length (AA) pI
1rnvL 204 5,45020
1Iyuj 194 6,58198
1JOcA 171 8,52345
1KB2Z 219 6,70344
1KuTi 200 7,76673
1Lekw 239 8,83773
1LvOv 195 8,62782
1NV6k 197 9,08097
1ipRN 212 7,05096
2A3OY 199 6,48899
2LUk3 251 9,02308
2MghT 212 9,20623
2rIfO 210 9,22763
2rvdN 191 8,59584
2ttDK 217 8,49792
2vdIG 213 9,19185
2yzHr 202 9,28727
39Sui 197 9,24614
3NBa9 199 9,28566
3QAsD 204 6,42942
3aBfI 218 9,20617
3kmq 214 6,70316
40Wsz 239 8,44421
4f5GE 200 5,86700
4fOxd 238 7,70966
4gEBV 188 7,71927
4gQlG 266 6,24379
4iVXF 212 9,77168
5H7ie 227 6,03399
5j9nP 215 9,26509
6R0sp 218 7,07727
6U5QS 248 7,17225
6U5by 222 8,15127
80FGo 246 7,11530
8fPh4 199 5,60537
8flqY 197 7,76002
8lhCL 248 8,26448
8lium 256 7,65146
8tzEQ 201 8,53337
IoEf 198 5,60151
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_35550
11ymJ
 18 31,8% 220 4.715E-43
2 phalp2_34876
4dSN5
 40 33,0% 209 7.160E-41
3 phalp2_39032
8lvvx
 15 27,2% 242 8.814E-40
4 phalp2_24391
4eTR4
 9 26,8% 227 1.823E-37
5 phalp2_22730
8dH10
 29 30,6% 160 6.292E-34
6 phalp2_36749
6BXWz
 16 31,4% 181 2.404E-31
7 phalp2_2862
j09p
 5 35,7% 179 3.287E-31
8 phalp2_38726
107BU
 2 30,6% 137 1.023E-29
9 phalp2_18623
3ebV
 83 30,5% 170 2.325E-28
10 phalp2_27905
l4Bb
 39 35,3% 178 8.103E-28

Domains

Domains
PET_M23
Representative sequence (used for alignment): 1rnvL (204 AA)
Member sequence: 4Ss2i (227 AA)
1 204 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01551

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (1rnvL) rather than this protein.
PDB ID
1rnvL
Method AlphaFoldv2
Resolution 88.61
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50