Protein

Protein accession
4RpMx [EnVhog]
Representative
6Vbo4
Source
EnVhog (cluster: phalp2_16501)
Protein name
4RpMx
Lysin probability
68%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
VSGAARLAAADRHDAAVEFLARALLAETDGYSLRGMEALAATVMNRVRLARQPGGKVAWGIDLGRAVAHDEAFPAGVRAASEYEAATMQVCRRVAARAACGALPDPTRGATRWHHAGTVPAWADGQAPTLALPRWVFYRIES
Physico‐chemical
properties
protein length:142 AA
molecular weight:15076,0 Da
isoelectric point:9,29
hydropathy:-0,04
Representative Protein Details
Accession
6Vbo4
Protein name
6Vbo4
Sequence length
156 AA
Molecular weight
16386,59560 Da
Isoelectric point
7,93105
Sequence
MNPAEAMADTLARTLYAEAGTRPVRAIEALAALAMNRARAAMPRPARQPGAAPFAPGGHARLPDPGPGEVLAACRDPFLFPAWNPRHPSHALLASPPEADPALAMCRRIAARALAGALPDPTGGATHWHGEGRLPAWALAHDSIAEISGLTFYRLE
Other Proteins in cluster: phalp2_16501
Total (incl. this protein): 26 Avg length: 158,1 Avg pI: 9,36
Protein ID Length (AA) pI
6Vbo4 156 7,93105
1HZDa 154 10,40018
1rou1 186 9,03958
1rubc 151 8,68726
2G8vi 185 9,29017
47nZO 154 9,47423
4C5Li 150 10,41250
4CbYZ 142 10,40541
59Ppp 171 11,07214
6RA8R 170 9,25710
6Rtij 164 8,48135
6Rtyc 169 7,94458
6RzRD 157 9,19643
6TeSP 175 10,00274
76Ot6 177 10,49598
7LSkC 150 7,76480
7b58D 143 9,35908
7drT9 142 9,20417
7sao5 148 8,70060
7vFUV 143 9,77020
7vUTq 152 9,34716
7whWe 151 8,68700
96vU 143 9,35960
f3jY 165 9,57402
kY4x 170 10,31496
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_30522
5nIjU
 6 44,0% 150 1.285E-37
2 phalp2_18469
6HUO8
 1331 35,8% 148 2.098E-26
3 phalp2_24645
5Bc4f
 8 33,1% 151 1.539E-20
4 phalp2_3473
4dQaD
 481 31,7% 145 6.617E-19
5 phalp2_36030
5JouX
 4 28,5% 147 2.529E-16
6 phalp2_22076
5Jkik
 65 26,8% 164 4.726E-16
7 phalp2_20644
4QrcK
 1 29,8% 151 7.854E-15
8 phalp2_29118
72xRP
 2 28,3% 155 2.002E-14
9 phalp2_15439
40vWj
 11 30,8% 146 3.736E-14
10 phalp2_14832
7qvQD
 19 29,8% 154 1.775E-13

Domains

Domains
Unannotated
Representative sequence (used for alignment): 6Vbo4 (156 AA)
Member sequence: 4RpMx (142 AA)
1 156 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
4RpMx
Method AlphaFoldv2
Resolution 85.60
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (6Vbo4) rather than this protein.
PDB ID
6Vbo4
Method AlphaFoldv2
Resolution 90.53
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50