Protein

Protein accession
4KBAE [EnVhog]
Representative
1lyD
Source
EnVhog (cluster: phalp2_2764)
Protein name
4KBAE
Lysin probability
86%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MNISQVGIDLIKKFEGCILHAYKDAVGVPTIGYGHTGGVIANQTITQAEADTLLRHDLDKFEDGVMNLVKVPINQNQFDALVSFSFNLGLGNLGNSTLLKYVNAKNFTAAAKEFAKWNKAGGEVLDGLTKRRAAEAALFSKPVPSAPKAPVKNGWIKNNQSQWNYYVNSVIQKDRWIQDKGHWYYLEGTVMKASSWVKYKEKWYHLGKSGAMDIGWIEDKGKKYFLNAKGEMVVGKQTINGKEYTFDKSGALVQ
Physico‐chemical
properties
protein length:254 AA
molecular weight:28288,0 Da
isoelectric point:9,35
hydropathy:-0,38
Representative Protein Details
Accession
1lyD
Protein name
1lyD
Sequence length
316 AA
Molecular weight
36173,32980 Da
Isoelectric point
5,64732
Sequence
MSSKRNLGIEGRNLIKSFEGYRNTAYLCQANVWTIGFGHTAGVKAGQVITLAQAETYLDVDVASAVNAVNSNVNSDIDINQNQFDSLVSFTFNCGVGALRSSTLLKYVNANDMNKAANEFLAWNKVTQNGVKVVSNGLVRRREAERLLFLKPVVKQGFVKTDSGEWNYYKEDGSKAVGWYEVENKHYYFEPNGNMKIGWVKYKENWYYLNSDGYMVVSWYEVDYNWYYFNSKGEMEVGWVNVDNEWYYLKDTGVAVMKEWRFLGEEWYYFNIDGKMVVGCEKIGNKTYVFGEDGRMLKGDITLKTDDKGAVVAIMQ
Other Proteins in cluster: phalp2_2764
Total (incl. this protein): 3 Avg length: 261,7 Avg pI: 8,04
Protein ID Length (AA) pI
1lyD 316 5,64732
5i0GW 215 9,11423
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_10187
xiY3
 70 41,1% 231 6.801E-54
2 phalp2_6725
21J6O
 3 21,2% 385 3.243E-18

Domains

Domains
GH24
Choline_bind_3
Representative sequence (used for alignment): 1lyD (316 AA)
Member sequence: 4KBAE (254 AA)
1 316 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF00959, PF19127

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
4KBAE
Method AlphaFoldv2
Resolution 94.81
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (1lyD) rather than this protein.
PDB ID
1lyD
Method AlphaFoldv2
Resolution 95.06
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50