Protein

Protein accession
4GmbV [EnVhog]
Representative
1rshv
Source
EnVhog (cluster: phalp2_680)
Protein name
4GmbV
Lysin probability
97%
PhaLP type
endolysin
Probability: 91% (predicted by ML model)
Protein sequence
MAKSVVPSVPAHLEVMRGWLGTKEIKGPRANPIIAGTPQSWSALVDRPDVTSDEVANCAMAGGAALVAAEFFKAEYELKDLIKGGPSALTILAQQGIFVPLPPKDQRLLAQSYNSYGTDARKNPQPGDIMILPRGDVRWQGHFVFLDTYLGNGRWRCIGANQSDTTSYAEHHVSEAMAIRRYVPPTIKDLRAAGSQAIARGDQQEAAGAALAVGVPAVTVAAKVVEASASQPAVDAAANLPQLAEQTGVLHTLTTTGVAMGNLVLQSPWLVGCVGAGILVWYLGRTGKLRRLASHIAGAPLSTQTS
Physico‐chemical
properties
protein length:306 AA
molecular weight:32233,5 Da
isoelectric point:8,75
hydropathy:0,02
Representative Protein Details
Accession
1rshv
Protein name
1rshv
Sequence length
305 AA
Molecular weight
31590,73590 Da
Isoelectric point
9,17148
Sequence
MAKSVAPYGGPVDVVVGWLGTKEIKGPKANPIIAGTPTSWFSLIGRDDVTSDEVANCAAAVGAGIVCYELQKAGITFEDVTAAAKAKPKRTAIQLLAERGVNVVLPPKDQRLLARSYSSFGIDASGDPQRGDIIVIPRGAAWQGHVMYIVSVNRQTGVAKCIGANQSDTTSYAEHHLSEAVAIRRYVPATIQGLRVAGSNAIHRGDQQEVAGGTLVLGGVGAAALQAATQPAADAAVSLAPLAEQTTTVHTLTTTGVSLGHIFLQSPWIVVLVGAGIGVWWLGRTGKLRRLAQHVAGVPLSSQSA
Other Proteins in cluster: phalp2_680
Total (incl. this protein): 10 Avg length: 265,2 Avg pI: 8,59
Protein ID Length (AA) pI
1rshv 305 9,17148
1XzZW 266 7,69949
1kBIp 271 8,33075
1rukn 316 8,92650
21cvn 172 9,33194
4F4G1 272 7,64640
4XNnD 263 7,84872
4f0UH 271 8,67920
4fwXt 210 9,51452
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_40516
4F9a4
 4 26,4% 310 2.397E-59
2 phalp2_40127
7ZTyg
 28 27,1% 295 7.364E-34
3 phalp2_32686
8dG3n
 26 31,4% 207 2.872E-28
4 phalp2_17303
4eTLb
 16 23,3% 206 1.440E-24
5 phalp2_33123
4M8WF
 3 20,7% 285 2.462E-22
6 phalp2_21029
9AcO
 22 23,6% 203 3.632E-18
7 phalp2_21703
3iJm5
 22 23,9% 196 8.071E-15
8 phalp2_2345
4T4j2
 3 19,6% 300 1.137E-13
9 phalp2_39271
47VoK
 404 22,9% 187 6.586E-13

Domains

Domains
Unannotated
Representative sequence (used for alignment): 1rshv (305 AA)
Member sequence: 4GmbV (306 AA)
1 305 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (1rshv) rather than this protein.
PDB ID
1rshv
Method AlphaFoldv2
Resolution 85.18
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50