Protein

Protein accession
4D52m [EnVhog]
Representative
5jO3n
Source
EnVhog (cluster: phalp2_35102)
Protein name
4D52m
Lysin probability
98%
PhaLP type
endolysin
Probability: 94% (predicted by ML model)
Protein sequence
MQRESDIMSIVEKFVELGLSHVGGGYVYGTNGEILTEALLRKKQAQLDPRQTGSFRPTYMDYIRANYMGKYVADCSGLVVSICRELDLDPKDYSASSLYYYQCNRKPISEITRGDLVFKKNSSSGKIYHVGIYLGGGEVLEAQGTKYGIRVNKLSSSWTLAGRLKVLGDAKAEPVAAEKPYTGIYQVDIKDIAGNRLNIRKTPGGNILAELAPKDYVRGLGLSELKDGLIWVKIESFNLADATGWVAGKYLKRIEKLPQDVADARGI
Physico‐chemical
properties
protein length:267 AA
molecular weight:29487,5 Da
isoelectric point:8,99
hydropathy:-0,28
Representative Protein Details
Accession
5jO3n
Protein name
5jO3n
Sequence length
262 AA
Molecular weight
29396,14190 Da
Isoelectric point
7,67152
Sequence
MSVVDKFIELGLSHVGGGYVYGTNGDILTEALLQNRMRLLDPLQTGSFRPKYMAHIRKNYMGKYVADCSGLIVSICRDLGLDKSDYSASRLYYYQCDRKPISEIERGDLVFKKNSTSGKVYHVGIYLGDNEVLEAQGTMYGIRVNKLSSSWTLAGRLKVFGNAKAEPAEPEKPYTGIYEVNIKDTPDNYLNIRDTPSGHLVARLAPHDFIKGLGQSEYKDGLMWVKVEPYNLADATGWVAEKYLKRIDELPAHVADALRQNN
Other Proteins in cluster: phalp2_35102
Total (incl. this protein): 4 Avg length: 266,3 Avg pI: 7,62
Protein ID Length (AA) pI
5jO3n 262 7,67152
4BpJc 276 5,08194
4FENG 260 8,71975
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_40165
8lvEw
 22 42,1% 173 8.020E-35
2 phalp2_15936
4JJEp
 1 26,1% 252 9.173E-27
3 phalp2_33418
6WYXp
 10 29,7% 239 1.055E-21
4 phalp2_21765
3WyXw
 205 30,0% 250 2.637E-21
5 phalp2_31731
3P98Z
 2 30,7% 179 5.546E-20
6 phalp2_16747
10xsQ
 2 32,1% 196 5.546E-20
7 phalp2_32200
6Xp2c
 36 35,3% 164 9.630E-18
8 phalp2_29727
1mb2p
 5 31,6% 196 7.979E-17
9 phalp2_17704
71inw
 139 28,3% 240 1.458E-16
10 phalp2_31501
3TJjZ
 324 31,1% 183 8.879E-16

Domains

Domains
NLPC_P60
Unannotated
Representative sequence (used for alignment): 5jO3n (262 AA)
Member sequence: 4D52m (267 AA)
1 262 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF00877

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (5jO3n) rather than this protein.
PDB ID
5jO3n
Method AlphaFoldv2
Resolution 86.72
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50