Protein

Protein accession
4BdgE [EnVhog]
Representative
3rO4B
Source
EnVhog (cluster: phalp2_24307)
Protein name
4BdgE
Lysin probability
99%
PhaLP type
endolysin
Probability: 91% (predicted by ML model)
Protein sequence
MARSNIKTIQRKVNVVSAYNLKVDGWAGKATEGAVIDLLDQLGANKIDEKEIDKNSSEPKTVHFSLSEFICRDGSKIPEELYLNGQMLMNAVEEIRMEYGKPILISSGYRSQKYNDNLIQNRSRAKPTLSMHILFGAADIKGSDGKVKEVGLIAKRFFDEGKIGGIAFGLYFIHVDLRGKIDYRNDKYLGFYNGIKSFSEWKRRAR
Physico‐chemical
properties
protein length:206 AA
molecular weight:23319,5 Da
isoelectric point:9,42
hydropathy:-0,46
Representative Protein Details
Accession
3rO4B
Protein name
3rO4B
Sequence length
217 AA
Molecular weight
24411,13100 Da
Isoelectric point
8,15972
Sequence
MGQAAAQRSDKMSSNKLLKATQQRLIKAGYNLGSSGADGRYGQYTDNAINDALDKAGLEEPEEPDSLQGLSSKYITEHFKWSEFTCKDGTEVPEKLKENAILLCKNILEPLRKEINNRYNGNNKIGITITSGYRTQSYNDKLSGTSNSQSMHIYAGAADIICKSISREELQSICLRMFNEYIIGGYGYGETCTHVDIRNLIDKTKFPYPNYRAKWTY
Other Proteins in cluster: phalp2_24307
Total (incl. this protein): 3 Avg length: 204,0 Avg pI: 7,82
Protein ID Length (AA) pI
3rO4B 217 8,15972
4ATDi 189 5,87757
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_40490
4AVAD
 7 31,4% 159 2.351E-20
2 phalp2_8512
1lzj9
 23 33,7% 228 2.772E-19
3 phalp2_23159
4JlN4
 28 31,7% 148 1.762E-16
4 phalp2_2371
7HZJU
 4 30,7% 169 2.040E-15
5 phalp2_20618
4JRfo
 7 30,7% 179 1.274E-14
6 phalp2_9390
8BY4U
 34 33,5% 140 4.917E-13
7 phalp2_29878
88K7B
 1 30,6% 160 4.106E-12
8 phalp2_35008
4PyN8
 2 29,2% 222 4.106E-12
9 phalp2_34489
4JkVR
 3 27,7% 166 4.605E-11
10 phalp2_27058
2g7gi
 18 30,6% 150 3.365E-08

Domains

Domains
Unannotated
PET_M15
Representative sequence (used for alignment): 3rO4B (217 AA)
Member sequence: 4BdgE (206 AA)
1 217 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF08291

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
4BdgE
Method AlphaFoldv2
Resolution 85.70
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (3rO4B) rather than this protein.
PDB ID
3rO4B
Method AlphaFoldv2
Resolution 81.57
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50