Protein

Protein accession
6ydPk [EnVhog]
Representative
6ydPk (this protein)
Source
EnVhog (cluster: phalp2_17596)
Protein name
6ydPk
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MVMNVWKAAIGRMAPHADPKIVAMVADHADSVFRDKGIISMRRQASILAHMCIESAYFRELQENLNYSAPRLEQVWPARFPNSTMAAAYAYDPKKLANKVYNGRMGNVPGTDDGWNFRGKGLLQLTGRDNVTRLANRLGITPELCAQWLIDPHHALECAAEIYNMLGIGPFADRDDMRGQTKRLNGGYNGLAERQNAYNKAMRVLAQYAAPTIIGQHSEDPSSDQQMDEITADKLRANNSKTVVAADNVKGAALGVMGAATAASSAISSANETVTQVQSIAESVKQGKTLLSVASEHWQLIVIFLSLIFMGFFAWLAWRNANKAIEARVQDARTGANLSR
Physico‐chemical
properties
protein length:340 AA
molecular weight:37282,1 Da
isoelectric point:9,05
hydropathy:-0,23
Other Proteins in cluster: phalp2_17596
Total (incl. this protein): 13 Avg length: 341,5 Avg pI: 7,71
Protein ID Length (AA) pI
1nCOQ 334 6,08373
3NNfY 342 9,19837
3NR6c 408 5,92378
4v8Vy 347 8,42075
6Czsl 304 7,69847
6DtlB 311 8,26789
6HZsG 302 6,14261
6KEQe 311 7,74956
729ak 339 8,75856
7p1pc 341 7,76110
7wagf 340 9,03300
8b447 420 6,08214
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_24250
35Uws
 23 34,4% 406 2.887E-88
2 phalp2_21618
2F7CT
 4 26,3% 384 7.915E-49
3 phalp2_16103
4eERs
 26 27,3% 344 1.079E-48
4 phalp2_26373
1p0GM
 42 24,9% 441 6.228E-45
5 phalp2_22433
K5Pz
 97 32,2% 223 7.612E-40
6 phalp2_26325
1bAUE
 20 31,8% 204 6.536E-37
7 phalp2_16916
27hsI
 40 22,3% 317 1.370E-33
8 phalp2_36897
7vUau
 3 30,5% 213 2.436E-31
9 phalp2_32955
3ZpUq
 39 28,7% 320 1.186E-27
10 phalp2_37822
4Fl5e
 1 28,8% 215 2.638E-22

Domains

Domains
Unannotated
Unannotated
Protein sequence: 6ydPk
1 340
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
6ydPk
Method AlphaFoldv2
Resolution 83.83
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50