Protein

Protein accession
1RkvG [EnVhog]
Representative
1RkvG (this protein)
Source
EnVhog (cluster: phalp2_31087)
Protein name
1RkvG
Lysin probability
97%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MKSGIDLSRWNNVVDWDLLPDDIGFVVMRASIGNYYTDPKFEDYFDAVCAKHLVTGAYHVLIADNEVESQLDRLELALNGRKPDMLVLDCELKGTVKENIRKRRTYWMMRKLDERWPTPVKLYYTNQSYWDTNIGSTYSGYRFDEFLLWIASYGKNDGQIPDTDKYPAIPDAWKDAIPQWWIWQYTSKGVIPGIEGNVDLNGMREDFFAKLDAKKECAATEPEPPIPPEPPSDLEDRVQALEDWVKSYPKDASSHE
Physico‐chemical
properties
protein length:256 AA
molecular weight:29659,0 Da
isoelectric point:4,72
hydropathy:-0,62
Cluster Membership

This protein is the only member recorded for this cluster.

Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_1137
5J3v
 11 29,7% 245 1.855E-18
2 phalp2_30061
2NCcc
 23 33,1% 244 2.513E-18
3 phalp2_5615
4g2xP
 40 32,0% 203 3.404E-18
4 phalp2_10644
2AeOK
 60 32,5% 212 6.244E-18
5 phalp2_36157
6TiaL
 25 32,2% 211 1.550E-17
6 phalp2_39912
1jXPT
 300 31,4% 207 7.041E-17
7 phalp2_5981
6El6s
 21 31,5% 238 5.297E-14
8 phalp2_34496
4KAJY
 27 32,5% 218 7.147E-14
9 phalp2_6394
5NLU
 30 27,3% 260 9.641E-14
10 phalp2_39458
4VDTp
 155 29,3% 211 1.300E-13

Domains

Domains
GH25
Protein sequence: 1RkvG
1 256
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01183

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1RkvG
Method AlphaFoldv2
Resolution 91.63
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50