Protein

Protein accession
41dmN [EnVhog]
Representative
2Vjdq
Source
EnVhog (cluster: phalp2_3306)
Protein name
41dmN
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MTNGELIYKLLQALRLPTVYVNGGWGWPMTNSNKSRALANPYNASYLRAPALQAATPQTFGFDCVCLIKSILWGWTGDASKRNGGAVYASNHVPDISADQMIRACGPRTDFDQIVPGAAVWIPGHIGVYVGDGCVIECTPIWADGVQLTGLNGPSDRCENWRSWSSWGLLPWVDYVDKVSPMVYDEFKQCMDKYLEELQAAPANRYATAALAWINNNGIMRGDGNGNLMPRGYLTRQDFALMLMRYDDKQKQ
Physico‐chemical
properties
protein length:252 AA
molecular weight:27997,6 Da
isoelectric point:6,11
hydropathy:-0,25
Representative Protein Details
Accession
2Vjdq
Protein name
2Vjdq
Sequence length
250 AA
Molecular weight
28354,80150 Da
Isoelectric point
5,41962
Sequence
MTDKEFVERIKGLLDYDTLYVNGGWGWPLDSANKNRALMNSYNAQPLRAYKIEQASRFTFAFDCVCMIKAVLWGWSGSYFDHNGGAKYAANGVPDINADRMISECGERYDWDHIVPGAVVWMKGHIGVYVGDGFVVEATPIWADGVQMTALNAPKAGYNWRKWSCWGLLPWVEYQPEDAMTYDDFKLFMHRYEAERKSLAADEYASEALEWAKANGISVGDAAGNLMPQAYVKRQDVVLMLYRAEKQHGK
Other Proteins in cluster: phalp2_3306
Total (incl. this protein): 8 Avg length: 249,6 Avg pI: 6,97
Protein ID Length (AA) pI
2Vjdq 250 5,41962
13aMH 258 8,66831
13tbd 205 4,86788
21vzo 252 8,97846
409wu 254 6,57732
7DNeY 273 7,55699
8fkp8 253 7,60360
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_16010
3o4Sp
 262 45,8% 207 6.446E-83
2 phalp2_16170
4yiWs
 67 53,8% 180 2.300E-79
3 phalp2_13292
3o9d4
 478 51,6% 180 1.373E-77
4 phalp2_13986
nz3U
 16 47,8% 188 2.103E-75
5 phalp2_20477
3TDR4
 13 40,0% 190 1.263E-55
6 phalp2_16941
40Gu8
 2 41,7% 158 4.568E-44
7 phalp2_24698
66NIa
 5 35,8% 184 7.849E-38
8 phalp2_13101
8tQAx
 63 34,7% 187 6.144E-36
9 phalp2_34755
3gjml
 29 28,2% 191 5.494E-28
10 phalp2_40315
3fNSi
 1 27,3% 194 7.484E-28

Domains

Domains
Unannotated
Unannotated
Representative sequence (used for alignment): 2Vjdq (250 AA)
Member sequence: 41dmN (252 AA)
1 250 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
41dmN
Method AlphaFoldv2
Resolution 92.25
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (2Vjdq) rather than this protein.
PDB ID
2Vjdq
Method AlphaFoldv2
Resolution 94.74
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50