Protein

Protein accession
1RkWm [EnVhog]
Representative
1RkWm (this protein)
Source
EnVhog (cluster: phalp2_33904)
Protein name
1RkWm
Lysin probability
96%
PhaLP type
VAL
Probability: 99% (predicted by ML model)
Protein sequence
MMPVLESPIKASVNNIRKTPAFRRSTSKKTKLTTDFKSLERTLTVGNTKLKREKSLPTNKKIDKLSMRILSGLQGGGGGIAGAGLGFAVGAGTGAAASGLLGLAGGAVDLVGGLFDRGAKKGAQKGVQKGAQKATTKAATKAAGKGIGKGLLKKLPLVGLGLGAAFALERAASGDMVGALGELASGAAAMVPGWGTAASVAIDAGLIARDIDKENKTSEKVEEKLDEKREKLLGPASTRAVNGLLPALNKFEQYVDNFKSFSVSGSFNKDIAPGTKTDTMGSANPNMHTGDYPGFDTMERVAPFVTGYVSTYPGAQYGASRDNGTRTHLGQDIDGQDPGDPVLSVMKGTVVEVGTGFRFQNGQGTSQTIGIQHPDGTKTRYVHVLSDVAVGDEVLTGQKIGTVSPADVASSKDFPHLHFELYAKGGGVIDPRPFLNSAPKGTPGVAPITPNGETKIKPETDGADDRESAPMDPTVDPGNDGYDMTRTREGFLRSDIVDEETGFTRGDQEDMRVAKERRQAMVKALGRDGFAQALDNLGGNATVENYAAMMKAAGMTDQLKDILQQYRPGQLIDSGDAASTRGLVANDPMGRRFSAEAQSILDYEVPMLESYPTYNQEGGSPTFVIMNSGGQQSPRPSAPQMMRKDGKNETMIVPVGGLNRTIDEMLLTKLSRS
Physico‐chemical
properties
protein length:673 AA
molecular weight:70708,1 Da
isoelectric point:8,85
hydropathy:-0,41
Other Proteins in cluster: phalp2_33904
Total (incl. this protein): 4 Avg length: 675,0 Avg pI: 9,10
Protein ID Length (AA) pI
1Ta3b 679 9,33884
4jv4v 670 8,76269
8ymCt 678 9,46062
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_31982
54c0Z
 29 29,6% 462 4.865E-17
2 phalp2_26117
5Ix9
 25 28,2% 468 3.521E-13
3 phalp2_24020
89qwU
 74 25,6% 741 4.647E-13

Domains

Domains

No domain annotations available.

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1RkWm
Method AlphaFoldv2
Resolution 45.33
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50