Protein

Protein accession
3yhpd [EnVhog]
Representative
7r1w8
Source
EnVhog (cluster: phalp2_26077)
Protein name
3yhpd
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MAKTVRYVSTSSGVNVRDAAAGNKVRSLLQGTLMIYDTANAPVKKALNGTTYTWIKVTYYYQGANDQYLMATEATGWVTQDNTTKVSTTVPGKSSVYSGNQSYKQNERLVNARYIFDYLRSLSSTKRWSVNAICATLGNMEAESGITPGKWEVPENDSKGFGLVQWTPATKFINALKAGESKTDIDVQLRRIQAEVDGTYKQWTSDSHSPAMTFSEYTKSTKSVATLAEYFLRCYERPEITTGMVSERKRCAEKWYNILSAVGDI
Physico‐chemical
properties
protein length:265 AA
molecular weight:29550,9 Da
isoelectric point:9,14
hydropathy:-0,48
Representative Protein Details
Accession
7r1w8
Protein name
7r1w8
Sequence length
265 AA
Molecular weight
29633,94090 Da
Isoelectric point
8,91367
Sequence
MAKTVRYVSTSSGVNVRDAAAGNKVRSLPQGTLMIYDTANAPVKKALNGTTYTWIKVTYYYQGANDQYLMATEATGWVTQDNTTKVSTTVPGKSSVYSGNQSYKQNERLVNARYIFDYLRSLSSTKRWSVNAICATLGNMEAESGITPGKWEVPEEDSKGFGLVQWTPATKFIDELKPGESKTDIDVQLRRIQAEVDGTYKQWTSNSHSPAMTFSEYTKSTKSVATLAEYFLRCYERPEITTGMVSERKRCAEKWYNILSAVGDI
Other Proteins in cluster: phalp2_26077
Total (incl. this protein): 2 Avg length: 265,0 Avg pI: 9,03
Protein ID Length (AA) pI
7r1w8 265 8,91367
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_11784
83ZZs
 17 44,5% 166 2.859E-29
2 phalp2_1644
8rpOB
 718 43,0% 165 8.576E-26
3 phalp2_24351
3WG2N
 78 32,5% 178 1.883E-14
4 phalp2_9119
5OLtN
 133 34,4% 186 8.380E-14
5 phalp2_35162
5KPsY
 6 28,3% 208 2.485E-10
6 phalp2_1448
1Gj9N
 1 28,4% 190 1.936E-09
7 phalp2_34335
3TOJ0
 25 26,1% 199 6.530E-06
8 phalp2_22973
3nvXZ
 6 24,5% 208 8.644E-05

Domains

Domains
Phage_lys2
Representative sequence (used for alignment): 7r1w8 (265 AA)
Member sequence: 3yhpd (265 AA)
1 265 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF18013

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
3yhpd
Method AlphaFoldv2
Resolution 95.85
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (7r1w8) rather than this protein.
PDB ID
7r1w8
Method AlphaFoldv2
Resolution 95.97
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50