Protein

Protein accession
3yMiZ [EnVhog]
Representative
1kAKU
Source
EnVhog (cluster: phalp2_10309)
Protein name
3yMiZ
Lysin probability
92%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MSLPISSTXXXXAAEDVFTKEKGLSVRKFRDAKYDKDWEAQFYILRKTLCPAVLTENFFQDNKTDVKYMLSAAGRKDIVSVHLTGVENYLKNRKR
Physico‐chemical
properties
protein length:95 AA
molecular weight: Da
isoelectric point:9,44
hydropathy:
Representative Protein Details
Accession
1kAKU
Protein name
1kAKU
Sequence length
85 AA
Molecular weight
9750,23250 Da
Isoelectric point
8,68487
Sequence
MFLAKMLANEAEMAGLRVRKPSPNQPYWHQNLAICRDTICPAVLTENLFQDNRQDVDYLLSGEGRRAIVQIHVNGIMKYIKAYSL
Other Proteins in cluster: phalp2_10309
Total (incl. this protein): 14 Avg length: 88,4 Avg pI: 6,15
Protein ID Length (AA) pI
1kAKU 85 8,68487
1FXSI 104 5,28861
1n8BE 84 4,88334
21gtt 76 4,91085
3iDFC 65 6,06565
3kBUJ 62 4,88408
4kbey 79 5,83955
5UgIp 48 4,99674
6b0xR 96 5,61822
6eLXI 101 4,95161
7DUcr 73 4,84737
A27i 71 6,91181
A0A8S5N1L0 199 8,82870
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_3780
5OOrY
 15 48,2% 85 7.644E-29
2 phalp2_21730
3zIto
 9 42,1% 57 8.561E-15
3 phalp2_37524
3idF1
 3 35,1% 54 1.896E-08
4 phalp2_28823
4UA07
 1 23,9% 71 9.293E-04

Domains

Domains
Unannotated
Representative sequence (used for alignment): 1kAKU (85 AA)
Member sequence: 3yMiZ (95 AA)
1 85 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
3yMiZ
Method AlphaFoldv2
Resolution 77.72
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (1kAKU) rather than this protein.
PDB ID
1kAKU
Method AlphaFoldv2
Resolution 95.04
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50