Protein

Protein accession
3yA4w [EnVhog]
Representative
2VnNi
Source
EnVhog (cluster: phalp2_21653)
Protein name
3yA4w
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
VPQSGDIVLYDWDDNGVGDNKGGADHIGIVVSVSGSTIKVIEGNISNAVGYRNLAVNGKYIRGFVTPKYSSKATSSTGSTSSTGGSTGALKYKVGDLVQFTGCLHYTSSYSGGVAKACKAGVAKVTQLSKGQPHPYHLKAVAGKGSTVYGWVNEADIAGLASGTTQKTYTVVKGDNLTKIAKKYGTTVDTLVALNGIKNKNLIYVGQVIKLP
Physico‐chemical
properties
protein length:212 AA
molecular weight:21952,6 Da
isoelectric point:9,54
hydropathy:-0,13
Representative Protein Details
Accession
2VnNi
Protein name
2VnNi
Sequence length
200 AA
Molecular weight
21835,42230 Da
Isoelectric point
9,18663
Sequence
MIELFQKLGAWNENDSYVPKPGDVIFYDWQDSGSGDNTGWPDHVGIVETVSGSTITVIEGNKSDSVSRRTLKVGGKYIRGYGVLKYAESPEDSKPTPEAAPKKNVDELAKEVIDGKWGNGTDRKNRLTAAGYDYSAVQAKVNELLKKPASAAVWYTVKSGDTLSAIARKYGTSVAAIQKLNPTLIKNVNLIITGWKIRVK
Other Proteins in cluster: phalp2_21653
Total (incl. this protein): 2 Avg length: 206,0 Avg pI: 9,36
Protein ID Length (AA) pI
2VnNi 200 9,18663
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_7368
4xoTh
 314 40,1% 234 5.839E-56
2 phalp2_29627
7ZDsR
 1 37,5% 149 1.148E-40
3 phalp2_17221
3xRQT
 3 54,6% 161 3.234E-35
4 phalp2_33156
7DPYX
 1 39,5% 205 6.650E-33
5 phalp2_5222
7UFuF
 20 37,2% 188 2.077E-23
6 phalp2_9136
6d0dy
 3 32,5% 215 5.589E-21
7 phalp2_38035
63Vjb
 2 38,1% 144 3.148E-19
8 phalp2_43
7DRjv
 2 39,0% 141 5.223E-16
9 phalp2_18807
1gBg7
 77 33,3% 144 1.223E-09
10 phalp2_40559
4Obnr
 7 24,0% 179 4.550E-08

Domains

Domains
CHAP
CW_7
LysM
Representative sequence (used for alignment): 2VnNi (200 AA)
Member sequence: 3yA4w (212 AA)
1 200 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01476, PF05257, PF08230

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
3yA4w
Method AlphaFoldv2
Resolution 85.81
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (2VnNi) rather than this protein.
PDB ID
2VnNi
Method AlphaFoldv2
Resolution 87.55
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50