Protein

Protein accession
6RCDf [EnVhog]
Representative
6RCDf (this protein)
Source
EnVhog (cluster: phalp2_17665)
Protein name
6RCDf
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MPIARSGSGWYLAKSLGVLYDQIDKAFPGRDDSSDGTIGNRAHQATNSDHNPHGGVVYALDITHDPAHGVDTYALAEQLRAGEDERIEYIISDRKIASGTGQSHTAWEWRPYNGENPHDMHIHVNVKDVPLGDKTEAWELGAIPLPVPTTGKPSLAKGSRGEEVKVVQQLLMVDGIFGPSTEKAVKQFQKDNGLSIDGIVGPYTWRALLKAVPVLVELEGKWIENVTATVFGGSSELERSAYDSHPITENEMAVALPDRFEGKRPVIEVKSDKGAFQATIEDVGPWNVNDPYWETLGQRPDAETHKIAGTPLTLDGPNKGRIPANAAGIDLSPALARKLGVDGKGLVSWRFVV
Physico‐chemical
properties
protein length:353 AA
molecular weight:38303,4 Da
isoelectric point:5,33
hydropathy:-0,43
Other Proteins in cluster: phalp2_17665
Total (incl. this protein): 15 Avg length: 353,4 Avg pI: 7,81
Protein ID Length (AA) pI
1IIde 343 8,90420
1Lio0 343 8,59275
1bkwq 401 5,46168
1p7wN 347 6,59278
3dJPL 350 9,75627
4IAst 376 5,87126
4U5eL 343 8,86893
4fIel 352 8,57567
5GTzX 294 6,30239
5Hpb4 395 9,61270
5nOjB 308 9,43625
6I6a0 358 5,45475
7wdyI 395 9,86058
t5pf 343 8,56090
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_29967
8jo1u
 9 46,5% 234 1.028E-77
2 phalp2_16371
5F76f
 2 45,3% 247 1.254E-76
3 phalp2_38540
1IvfW
 2 25,5% 309 5.335E-32
4 phalp2_39642
6LJcA
 58 30,0% 243 3.525E-21

Domains

Domains
Unannotated
PG_1
Unannotated
Protein sequence: 6RCDf
1 353
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01471

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
6RCDf
Method AlphaFoldv2
Resolution 85.70
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50