Protein

Protein accession
6PD6d [EnVhog]
Representative
6PD6d (this protein)
Source
EnVhog (cluster: phalp2_2625)
Protein name
6PD6d
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MSEPVLHQGDHGGAVCILQRALNLRGAQPVKLVVDGIFGGKVFRAVEDWQHKRGLPVTGIVNQPTWASLDIEPPAPAARPASLALYCHVHGQPDVYSQGADRWQGIADHVKAWDMAHIADCSAFFVWLYYACGWPDPTGQGYSGLEEYTGTLQDHGTRVASPAPNDAVLYAPHGQSQSSHVAIYVGGGMVVSHGIPGPPQYVATANMGGLAILEYRRY
Physico‐chemical
properties
protein length:218 AA
molecular weight:23436,2 Da
isoelectric point:6,08
hydropathy:-0,14
Cluster Membership

This protein is the only member recorded for this cluster.

Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_11530
QRas
 56 36,7% 234 4.762E-25
2 phalp2_2293
4EKVk
 41 38,0% 142 5.225E-15
3 phalp2_13720
6CIZL
 2 27,6% 235 7.679E-12
4 phalp2_30565
5GWP0
 10 29,9% 227 3.859E-10
5 phalp2_28344
1dbWy
 2 27,9% 243 1.281E-09
6 phalp2_6465
kRy5
 4 29,2% 154 2.539E-08
7 phalp2_35286
6W54f
 1 32,6% 153 4.605E-08
8 phalp2_10916
4EDMv
 2 25,6% 246 2.344E-04

Domains

Domains
PG_1
Unannotated
Protein sequence: 6PD6d
1 218
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01471

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
6PD6d
Method AlphaFoldv2
Resolution 75.83
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50