Protein

Protein accession
6LKdp [EnVhog]
Representative
6LKdp (this protein)
Source
EnVhog (cluster: phalp2_38114)
Protein name
6LKdp
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MPIGVDVSKWNVSSDGKTMWNPNRALKPIDFVIQRVSYGGSSGSQVKDELLEPMYAMVQQVPVRGAYHYYSSHSNWKTQADFFLNIVKAKDYHFYAIDYETAYNTLDRRTIAEFAQFVDYVKAQTGKRVLAYFNWNVFETFIKPYGYASWANEQDVWYAWYPYQITEEPRPRPTLPSGLTRWRIWQYGAGDVAGTAGVNAGANYGGGSRGIDLNTYNGTIEDMLDWCLLDKPEAMPISDAEKLKRLWDAHKELH
Physico‐chemical
properties
protein length:254 AA
molecular weight:29190,4 Da
isoelectric point:5,97
hydropathy:-0,51
Other Proteins in cluster: phalp2_38114
Total (incl. this protein): 21 Avg length: 260,1 Avg pI: 6,90
Protein ID Length (AA) pI
1Zu13 254 6,51184
1ikQY 269 8,54981
2D9S4 248 8,89781
2OOVy 299 8,94372
2bwg6 306 7,00662
2umPz 184 6,71657
2wObr 244 5,61151
3S2XO 257 5,68517
3T7wz 240 8,67224
4ZG9O 259 5,28133
4dOkD 249 5,93339
4hBZC 265 5,15214
4iEHU 241 8,34700
7Cx4 244 6,28840
85FXc 239 5,12372
85NCR 262 7,79721
DGzu 299 8,66218
YfNO 243 5,47970
YgMa 308 5,23251
cXwu 299 9,12623
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_3637
4SRiW
 1 28,8% 253 1.895E-38
2 phalp2_37847
4KqBl
 1 24,8% 245 9.581E-36
3 phalp2_6394
5NLU
 30 28,4% 281 6.189E-35
4 phalp2_40216
2nOML
 3 28,8% 267 8.446E-35
5 phalp2_28140
8jxl
 100 29,5% 271 1.658E-32
6 phalp2_26214
jZqY
 82 27,8% 244 3.683E-31
7 phalp2_32458
15woi
 1 25,8% 174 5.983E-30
8 phalp2_6038
7E6de
 10 26,2% 278 3.334E-28
9 phalp2_17115
2A8rZ
 22 22,2% 252 2.169E-25
10 phalp2_40449
4jDY9
 1 22,9% 274 2.966E-23

Domains

Domains
GH25
Protein sequence: 6LKdp
1 254
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01183

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
6LKdp
Method AlphaFoldv2
Resolution 93.98
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50